Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq489 298 1e-78 seq402 293 4e-77 >seq489 Length=7632 Score = 298 bits (330), Expect = 1e-78 Identities = 257/314 (82%), Gaps = 7/314 (2%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCG---CTTTGGCGG-GTCGCCGGCTTC 75 || ||||||||||||||||||||||| | | || ||| || || | | |||| Sbjct 2299 GAACGAGACCTTAACCTGCTAAATAGTTA--CACGTAACTTCGGTTACGTGGGCAACTTC 2356 Query 76 TTAGAGGGACTAT-CGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGC 134 ||||||||||| | || || | | | |||||||||||||||||||||||||||||||| Sbjct 2357 TTAGAGGGACTTTGCGTGTCTAACGCAAGGAAGTTTGAGGCAATAACAGGTCTGTGATGC 2416 Query 135 CCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTT 194 ||||||||||||||||| |||||||||||||||||| ||||||||| || ||||| Sbjct 2417 CCTTAGATGTTCTGGGCTGCACGCGCGCTACACTGATGCGTTCAACGAGTTTATGACCTT 2476 Query 195 GGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAAT 254 | | |||| | ||||||||||| ||||| ||||| |||||||||| |||||||| Sbjct 2477 GCCTGGAAAGGTTGGGTAATCTTTTTAAATCGCATCGTGATGGGGATAGATTATTGCAAT 2536 Query 255 TATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGT 314 |||| ||||||||||||||| ||||||||||||| ||||||||| || | ||||||||| Sbjct 2537 TATTAATCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGTGCTGATTACGT 2596 Query 315 CCCTGCCCTTTGTA 328 |||||||||||||| Sbjct 2597 CCCTGCCCTTTGTA 2610 >seq402 Length=8548 Score = 293 bits (324), Expect = 4e-77 Identities = 223/260 (86%), Gaps = 4/260 (2%) Strand=Plus/Plus Query 70 GGCTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128 ||||||||||||||||| |||| | | |||| ||||||| | |||||||||||||||| Sbjct 3287 GGCTTCTTAGAGGGACTTTCGGTGACTAACCGAAGGAAGTTGGGGGCAATAACAGGTCTG 3346 Query 129 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT 188 |||||||||||||||| ||||||||||||||||||||||||||| | || ||||| | | Sbjct 3347 TGATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGACACACGCAGCGAGT-CTT 3405 Query 189 CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCAT 248 | |||| ||| |||||| |||||||||||| || | ||||||| | |||||||| || Sbjct 3406 C--CTTGTCCGAAAGGTCCGGGTAATCTTGTAAATGTGTGTCGTGATAGGGATAGATTAT 3463 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 |||||||||| |||| |||||||||| |||||||| ||| ||||||||| |||||||| Sbjct 3464 TGCAATTATTAATCTTGAACGAGGAATTCCTAGTAAATGCGAGTCATCAGCTCGCGTTGA 3523 Query 309 TTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||| Sbjct 3524 TTACGTCCCTGCCCTTTGTA 3543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947042982656