Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq489 634 2e-179 seq402 612 6e-173 seq5976 75.2 4e-11 seq5532 75.2 4e-11 >seq489 Length=7632 Score = 634 bits (702), Expect = 2e-179 Identities = 464/533 (87%), Gaps = 12/533 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||||||||||| |||| | |||||||||||||||||||| Sbjct 6073 CTTTTGGTCCACATGAGATTTCTGTTCTCATTGAGCTCACCTTAGGACACCTGCGTTATC 6014 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||| ||||| || | | |||| Sbjct 6013 ATTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACTATGTCTTCCGCACAGATC 5954 Query 127 GGCCCGCGAAGGA-----CCTTAACGCCAGAAAATGGTCGGTGAAGACCAGT-TCCGCTT 180 || | || | ||||| ||| ||| | | | ||| | | ||| || | | Sbjct 5953 AACCATCAAAAAAGACAACCTTAGATCCA-AAACTCG-CTGTGGTG-CAAGTCTCAGTCT 5897 Query 181 CATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCC 240 | || ||||||||| || |||| |||||||||||||| ||| || ||||| Sbjct 5896 AACGGAATAAGTAAAATGACATTAAGAGTAGTGGTATTTCAAGGTTGCCAAA---GCTCC 5840 Query 241 CACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGG 300 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 5839 CACTTATTCTACACCTCCTAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGG 5780 Query 301 GTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAG 360 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 5779 GTCTTCTTTCCCCGCTGATTATCCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAG 5720 Query 361 TAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5719 TAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 5660 Query 421 GGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGA 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 5659 GGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGTTTGA 5600 Query 481 ATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5599 ATTTCATCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 5547 >seq402 Length=8548 Score = 612 bits (678), Expect = 6e-173 Identities = 460/535 (86%), Gaps = 18/535 (3%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| |||||||||||||| ||||| Sbjct 6909 CTTTTGTTCTACATGAGATTTCTGTTCTCATTGAGCTGACCTTAGGACACCTGTGTTATC 6850 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||| |||| | | |||| Sbjct 6849 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACGTTGTCTCCCGCGTAGATC 6790 Query 127 GGCCCGCGAAGGAC--CTTAACGCCAGAAAATGGTCGGTGAAGAC---CAG--TTCCGCT 179 | | ||| ||| ||| |||| |||| || | | || | | ||| | Sbjct 6789 ACCGCTCGA--GACGGCTTGACGCTAGAA-----TCAGACACGAATGTCTGGCTTCTACA 6737 Query 180 TCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCA-CTTGCGCCGAAACGGCT 238 ||| || ||||||||| ||| || | |||||||||||||| | | || || | || Sbjct 6736 TCACGGAATAAGTAAAACAACATTACGAGTAGTGGTATTTCATCGTTGGC---AAAGCCT 6680 Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298 ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| Sbjct 6679 CCCACTTATTCTACACCTCATAAGTCATTTCACAACGTCGGACTAGAGTCAAGCTCAACA 6620 Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 358 |||||||||||||||||||||| |||||||||||||||||||||| | |||||||||| Sbjct 6619 GGGTCTTCTTTCCCCGCTGATTATTCCAAGCCCGTTCCCTTGGCTGTAGGTTCGCTAGAT 6560 Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 6559 AGTAGATAGGGACAGTGGGAATCTCATTAATCCATTCATGCGCGTCACTAATTAGATGAC 6500 Query 419 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6499 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 6440 Query 479 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6439 GAATTCCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 6385 >seq5976 Length=1176 Score = 75.2 bits (82), Expect = 4e-11 Identities = 80/106 (75%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428 ||||||||| | |||||| |||||| ||| ||| | ||| ||| ||| |||| Sbjct 290 GACAGTGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTC 349 Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474 ||||||||| || || |||||||| |||||||||||| | |||| Sbjct 350 GCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTT 395 >seq5532 Length=1239 Score = 75.2 bits (82), Expect = 4e-11 Identities = 80/106 (75%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428 ||||||||| | |||||| |||||| ||| ||| | ||| ||| ||| |||| Sbjct 970 GACAGTGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTC 911 Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474 ||||||||| || || |||||||| |||||||||||| | |||| Sbjct 910 GCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTT 865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634928932896