Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq10039 181 2e-43 seq8814 167 5e-39 seq3582 163 6e-38 seq379 156 9e-36 seq2675 147 5e-33 seq204 118 2e-24 >seq10039 Length=819 Score = 181 bits (200), Expect = 2e-43 Identities = 180/232 (78%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 82 AAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCT 141 |||||| ||||||| || || |||||||| ||||||| | |||||| |||| || | Sbjct 214 AAAGAATTTTACAACCCTAAGG-CCTTCATCATTCACGCGGCATGGCTGCATCAGGCTTT 272 Query 142 CGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGT 201 || |||||| ||||||||| |||||||||||||||||||||| ||| |||||||||||| Sbjct 273 CGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGT 332 Query 202 TCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTA 261 ||| ||||| | | |||||||||| | |||| ||||||| || ||| || ||| Sbjct 333 CCCAGTGTGGCTGGTCGTCCTCTCAGACCAGCTATAGATCGTAGCCTTGGTAAGCTCTTA 392 Query 262 CCCCGCCTACTACCTAATGGAACGCATCCCCATCGTACACCGATGAATCTTT 313 || || |||| ||||| ||||| || ||| | ||||||| ||||||| Sbjct 393 CCTTACCAACTAGCTAATCTAACGCGGGCCAATCTTTCACCGATAAATCTTT 444 >seq8814 Length=899 Score = 167 bits (184), Expect = 5e-39 Identities = 177/232 (76%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 82 AAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCT 141 ||||| ||||| | || || |||||||| |||||| | ||||| | |||| || Sbjct 30 AAAGAGCTTTACGACCCTAAGG-CCTTCATCACTCACGCGGCATGGCTAGATCAGGCTTG 88 Query 142 CGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGT 201 || |||||| | || ||||| |||||||||||||||||||||| ||| |||||||||||| Sbjct 89 CGCCCATTGTCTAAGATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGT 148 Query 202 TCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTA 261 ||| ||| | || | |||||||| | | |||| ||||||| || ||| |||| ||| Sbjct 149 CCCAGTGTTGCTGATCATCCTCTCAAACCAGCTATAGATCGTAGACTTGGTAGGCCATTA 208 Query 262 CCCCGCCTACTACCTAATGGAACGCATCCCCATCGTACACCGATGAATCTTT 313 |||| || |||| ||||| ||||| || ||| | | ||||| ||||||| Sbjct 209 CCCCACCAACTATCTAATCTAACGCGGGCCGATCCTTCTCCGATAAATCTTT 260 >seq3582 Length=1677 Score = 163 bits (180), Expect = 6e-38 Identities = 176/232 (76%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 82 AAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCT 141 ||||| ||||| | || ||| |||||||| |||||| | ||||| | |||| || Sbjct 370 AAAGAGCTTTACGACCC-TAGGGCCTTCATCACTCACGCGGCATGGCTAGATCAGGCTTG 428 Query 142 CGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGT 201 || |||||| | || ||||| |||||||||||||||||||||| ||| |||||||||||| Sbjct 429 CGCCCATTGTCTAAGATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGT 488 Query 202 TCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTA 261 ||| ||| | || | |||||| | | | |||| ||||||| || ||| |||| ||| Sbjct 489 CCCAGTGTTGCTGATCGTCCTCTAAAACCAGCTATAGATCGTAGACTTGGTAGGCCATTA 548 Query 262 CCCCGCCTACTACCTAATGGAACGCATCCCCATCGTACACCGATGAATCTTT 313 |||| || |||| ||||| ||||| || ||| | ||||| ||||||| Sbjct 549 CCCCACCAACTATCTAATCTAACGCGGGCCAATCCTTTCCCGATAAATCTTT 600 >seq379 Length=8950 Score = 156 bits (172), Expect = 9e-36 Identities = 204/286 (71%), Gaps = 20/286 (7%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||||||||||||||||| |||| ||| | ||||| || Sbjct 64 GGCTGCTGGCACGGAGTTAGCCGGAGCTTCTTCTGAGGGTACCGTCA------------- 110 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 || | ||||| | | |||| ||||||| || || |||||||| ||||| Sbjct 111 ------TTATCTTCCCCTCTGAAAGTGTTTTACAACCCTAAGG-CCTTCATCACACACGC 163 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | |||||| |||| || ||| |||||| ||| ||||| |||||||||||||||||| Sbjct 164 GGCATGGCTGCATCAGGCTTTCGCCCATTGTGCAAGATTCCCCACTGCTGCCTCCCGTAG 223 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| ||| |||||||||||| ||| ||||| || | |||||||||| | |||| || Sbjct 224 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTATAGAT 283 Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGC 286 ||| | || |||| || ||||| | || || | ||||| ||||| Sbjct 284 CGTCGCCTTGGTGAGCTTTTACCTCACCAACAAGCTAATCTAACGC 329 >seq2675 Length=2078 Score = 147 bits (162), Expect = 5e-33 Identities = 141/181 (78%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 133 TCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCG 192 |||| || || |||||| | || ||||| |||||||||||||||||||||| ||| ||| Sbjct 2078 TCAGGCTTGCGCCCATTGTCTAAGATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 2019 Query 193 TGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGT 252 ||||||||| ||| ||| | || | |||||||| | | |||| ||||||| || ||| Sbjct 2018 TGTCTCAGTCCCAGTGTTGCTGATCATCCTCTCAAACCAGCTATAGATCGTAGACTTGGT 1959 Query 253 GGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATCGTACACCGATGAATCTT 312 |||| ||||||| || |||| ||||| ||||| || ||| | | ||||| |||||| Sbjct 1958 AGGCCATTACCCCACCAACTATCTAATCTAACGCGGGCCAATCCTTCTCCGATAAATCTT 1899 Query 313 T 313 | Sbjct 1898 T 1898 >seq204 Length=12833 Score = 118 bits (130), Expect = 2e-24 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 88 GTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCA 147 ||||||| |||| |||||||| ||||| | | ||| ||| || ||| || Sbjct 12559 GTTTACACGGCGTAACCGCTTCATCCCACACGCGGCATTGCTCCGTCACGCTTTCGCGCA 12618 Query 148 TTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAAT 207 ||| || |||| | ||||| ||||||||||||||| |||| ||||||||||||| || Sbjct 12619 TTGCGGAAGATTCGTTACTGCAGCCTCCCGTAGGAGTCCGGACAGTGTCTCAGTTCCGAT 12678 Query 208 GTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGC 267 | || || || | |||||| | || ||| || || | |||| ||| |||| ||||||| | Sbjct 12679 GCGGCGGGCCATGCTCTCACACCCGCTACCCGTCTTCGGCTTGGTAGGCCTTTACCCCAC 12738 Query 268 CTACTACCTAATGGAACG 285 | || |||| || | ||| Sbjct 12739 CAACAACCTGATAGGACG 12756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068622825024