Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq402 125 1e-26 seq489 102 1e-19 >seq402 Length=8548 Score = 125 bits (138), Expect = 1e-26 Identities = 100/118 (85%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| ||||||||| || || || |||| ||| |||| Sbjct 7234 GTACGAGAGGAACCGTTGG-TTCAGAC-AATTGGTTTATGGGGTTGGCTGAACAGCCAGT 7291 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||| |||||||||||||||| ||| ||| ||||||||||||||||||||||| |||| Sbjct 7292 GCCCCGAAGCTACCATCTGCAAGATAATGACTGAACGCCTCTAAGTCAGAATCTATGC 7349 >seq489 Length=7632 Score = 102 bits (112), Expect = 1e-19 Identities = 95/118 (81%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | |||||| || ||||| ||||||| |||| || | | Sbjct 6399 GTACGAGAGGAACA-CTTCGTTCAGA-TACTTGGTAAATGCGGCTAGCTGAAAAGCTAAT 6456 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 |||||||||||||||||| ||||||| | ||||||||||||||||| |||||||||| Sbjct 6457 ACCGCGAAGCTACCATCTGTTGGATTACGACTGAACGCCTCTAAGTCGGAATCCATGC 6514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819068444928