Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_009552.2 Length=40863 Score E Sequences producing significant alignments: (Bits) Value seq486 215 1e-51 seq10619 154 4e-33 seq1036 145 2e-30 seq44 131 4e-26 seq6724 116 1e-21 >seq486 Length=7659 Score = 215 bits (238), Expect = 1e-51 Identities = 510/765 (67%), Gaps = 18/765 (2%) Strand=Plus/Minus Query 37693 CGGCGTCGAAAAAGAAGACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCT 37752 ||||||| || || || || || ||| |||||||| ||||| |||||| |||| | Sbjct 3283 CGGCGTCCGCAAGGACGATCGCACCGGCACGGGCACGCTCTCGGTCTTCGGCTACCAGAT 3224 Query 37753 CCGCTTCAACTTACAAGATG------------GATTTCCGCTCGTGACAACGAAAAAATT 37800 ||||||||| | | || | | || || || || || || || || | Sbjct 3223 GCGCTTCAACCTCGATGAGGCCACCGGCGGCGGGTTCCCACTGGTCACCACCAAGAAGGT 3164 Query 37801 GCATATCCGCTCCATCATTTATGAACTGCTTTGGTTTTTAAAAGGCGATACGAACGTCCG 37860 || | ||||| ||||| | || ||||| ||||| | |||||||| |||||| || Sbjct 3163 CCACACGCGCTCGATCATCCACGAGCTGCTGTGGTTCCTCAAAGGCGACACGAACATCGC 3104 Query 37861 CTATTTGCAGGAGAATGGCGTGACGATTTGGGATGAGTGGGCGGACGAAAACGGCGATCT 37920 ||| || |||| || || || || ||||| |||||||| || | |||| | || Sbjct 3103 CTACCTGAAGGACAACAAAGTCACCATCTGGGACGAGTGGGCCGATGCCGCCGGCAACCT 3044 Query 37921 CGGCCCGATTTACGGCGCGCAATGGCGCTCGTGGAAGGGAGCAGACGGGAAAACCATCGA 37980 ||||||| | |||||| ||| |||||||| ||| | | |||| | || ||||| Sbjct 3043 CGGCCCGGTCTACGGCAAGCAGTGGCGCTCCTGGCGCACGCCGGGCGGGGACACGATCGA 2984 Query 37981 CCAGATCGCATGGGTTGTCGAAGAGATCAAACGAAATCCGCATTCACGCCGGCTGCTGGT 38040 ||||||||| | || ||||| ||||||| || || || | || ||||||||| | || Sbjct 2983 CCAGATCGCCGGTGTCGTCGATCAGATCAAGCGCAACCCCGACTCGCGCCGGCTGATTGT 2924 Query 38041 GAGCGCTTGGAATGTAGCAGAATTGGACGAGATGAAGCTGCCGCCGTGTCATTACGCCTT 38100 ||||| ||||| || || ||| | ||| ||||| ||||||||||| || || Sbjct 2923 CAGCGCGTGGAACGTGGCCGAACTCGACCAGATGGCCCTGCCGCCGTGCCACCTGCTGTT 2864 Query 38101 TCAGTTCTATGTCGCCAACGGCCGGTTGTCATGCATGTGGCAGCAGCGCTCCGTTGATAC 38160 |||||||| |||||| |||| | || ||| | | |||||||| | || Sbjct 2863 CCAGTTCTACGTCGCCGGCGGCAAGCTGAGCTGCCAGCTCTACCAGCGCTCGGCGGACCT 2804 Query 38161 GTTTTTAGGGTTGCCGTTTAACATCGCGAGCTACGCGCTGTTGACGCATATGGTAGCCCA 38220 ||| | || ||||||| |||||||| || ||||| | ||||||| ||| | || || Sbjct 2803 GTTCCTCGGCGTGCCGTTCAACATCGCCAGTTACGCCATCCTGACGCACATGATCGCGCA 2744 Query 38221 -ACAATGCGACTTGGATGTCGGTGAACTCATTTTCACCGGCGGCGACGTCCATTTGTACA 38279 | | || |||| || || || || | |||| |||||| | || | |||| Sbjct 2743 GGTGACGGGA-TTGGGAGTGGGGGACTTCGTGCACACCTTCGGCGATGCGCACATCTACA 2685 Query 38280 AAAATCATCTGGAACAAGCGAAACTGCAGCTGACGCGCGAGCCGCGCCCGCTGCCGAAGC 38339 || || | || || | |||| ||||| |||||||| |||||||| ||| | Sbjct 2684 CCAACCACGTCGAGCAGGTGAAAACCCAGCTCGAGCGCGAGCACCGCCCGCTCCCG-TCC 2626 Query 38340 TTG-TGCTGAA-ACGGAAGCCGCCGTCTATCTTTGACTATGAATACGACGACTTTGAAAT 38397 ||| ||| || | || | | || | | || | | | ||||||| | | || Sbjct 2625 TTGAAGCTCAACCCCGAGGTCCGCGAC-CTGTTCGCGTTCAGCTTCGACGACATCGCCAT 2567 Query 38398 CGTCGGCTACGATCCGCATCCGGCGATTAAAGCACCGGTGGCGGT 38442 || |||||| ||||| |||||||| || || || |||||||| Sbjct 2566 CGAGAACTACGACCCGCACCCGGCGATCAAGGCGCCTGTGGCGGT 2522 >seq10619 Length=779 Score = 154 bits (170), Expect = 4e-33 Identities = 366/553 (66%), Gaps = 0/553 (0%) Strand=Plus/Plus Query 37784 GTGACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACTGCTTTGGTTTTTAAAA 37843 ||||| || || ||| ||||| || || ||||| |||| ||||| |||||| | Sbjct 1 GTGACCACCAAGAAACTGCATCTCAAATCGATCATCCATGAGCTGCTGTGGTTTCTGGCG 60 Query 37844 GGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGTGACGATTTGGGATGAGTGGGCG 37903 || ||||| ||| || |||| || ||| ||||||||| | || ||||| || ||||| Sbjct 61 GGTGATACCAACATCGCCTATCTGAAGGCGAATGGCGTCTCAATCTGGGACGAATGGGCC 120 Query 37904 GACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAATGGCGCTCGTGGAAGGGAGCA 37963 ||||||||||||||||| || ||| | |||||| ||||||||| ||| | | Sbjct 121 GACGAAAACGGCGATCTGGGGCCGGTCTACGGCCATCAATGGCGCAGCTGGCCGATGCCC 180 Query 37964 GACGGGAAAACCATCGACCAGATCGCATGGGTTGTCGAAGAGATCAAACGAAATCCGCAT 38023 || || ||||||||||| || || || | |||||||| || ||| | Sbjct 181 GATGGCGGCCATATCGACCAGATTGCCGCAGTGGTGAACCAGATCAAAACCAACCCGGAC 240 Query 38024 TCACGCCGGCTGCTGGTGAGCGCTTGGAATGTAGCAGAATTGGACGAGATGAAGCTGCCG 38083 || || | | || || || |||||||| || || | || | ||| |||||| Sbjct 241 AGCCGTCGACATATCGTCAGTGCCTGGAATGTCGCTGATGTTGATGGTATGGCCCTGCCG 300 Query 38084 CCGTGTCATTACGCCTTTCAGTTCTATGTCGCCAACGGCCGGTTGTCATGCATGTGGCAG 38143 || || |||| | |||||||||||||| || ||||| | | || || | | Sbjct 301 CCATGCCATTGCCTGTTTCAGTTCTATGTGGCTGACGGCAAGCTTTCGTGTCAGCTCTAC 360 Query 38144 CAGCGCTCCGTTGATACGTTTTTAGGGTTGCCGTTTAACATCGCGAGCTACGCGCTGTTG 38203 |||||| | |||| ||| | ||| |||| || || || || ||| ||||||||| Sbjct 361 CAGCGCAGTGCCGATATCTTTCTGGGGGTGCCCTTCAATATTGCCTCCTATGCGCTGTTG 420 Query 38204 ACGCATATGGTAGCCCAACAATGCGACTTGGATGTCGGTGAACTCATTTTCACCGGCGGC 38263 || | ||| | ||||| ||||| || | | || || | | ||| || Sbjct 421 ACAGAGATGATTGCCCAGGTCTGCGATCTGAAGGCGGGCGATTTTGTCCACACGTTTGGT 480 Query 38264 GACGTCCATTTGTACAAAAATCATCTGGAACAAGCGAAACTGCAGCTGACGCGCGAGCCG 38323 |||| ||| | || || ||||||||||| || | | |||||| | ||| || | | Sbjct 481 GACGCGCATCTTTATCTGAACCATCTGGAACAGGCCGACCGGCAGCTAAAGCGGGAACAG 540 Query 38324 CGCCCGCTGCCGA 38336 |||||||||| Sbjct 541 TTGCCGCTGCCGA 553 >seq1036 Length=4296 Score = 145 bits (160), Expect = 2e-30 Identities = 211/298 (71%), Gaps = 0/298 (0%) Strand=Plus/Plus Query 37651 AATGAAACAATATTTAGACTTGCTGCAAGACATCTTAGAAAACGGCGTCGAAAAAGAAGA 37710 |||||||||||| | || || ||| | | |||||| ||||| | ||| || Sbjct 1689 AATGAAACAATACCTTGATTTAATGCGCCATGTATTAGAACACGGCCATAAGAAAACCGA 1748 Query 37711 CCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAACTTACAAGA 37770 ||| || ||| ||||| | ||||| ||| || | || || | |||||| | Sbjct 1749 CCGCACCGGCACAGGCACCATCAGTGTGTTTGGCTATCAAATGCGTTTTGATTTACAACA 1808 Query 37771 TGGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACTGCT 37830 || |||||||| || || || ||||||| ||| | || || || ||| ||||| | || Sbjct 1809 GGGCTTTCCGCTTGTTACCACCAAAAAATGCCATCTGCGTTCGATTATTCATGAATTACT 1868 Query 37831 TTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGTGACGATTTG 37890 |||||||||||||| || || ||| | |||| |||| || |||||||| | || || Sbjct 1869 GTGGTTTTTAAAAGGTGAAACCAACATTGGCTACCTGCAAGAAAATGGCGTATCAATCTG 1928 Query 37891 GGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAATGGCGC 37948 | ||||||||||| |||| || || ||||| ||| | ||||||||||| |||||| Sbjct 1929 GAATGAGTGGGCGACTGAAACAGGTGAGCTCGGACCGGTATACGGCGCGCAGTGGCGC 1986 >seq44 Length=32007 Score = 131 bits (144), Expect = 4e-26 Identities = 479/746 (64%), Gaps = 3/746 (0%) Strand=Plus/Plus Query 37702 AAAAGAA-GACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCA 37760 |||||| ||||| || || ||||||| ||||||||||| | ||| | ||||| Sbjct 27357 AAAAGACCGACCGGACCGGTACAGGCACGCGCTCGGTGTTCGGGCATCAGATGCGCTTTG 27416 Query 37761 ACTTACAAGATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTT 37820 | | || || ||||| | || || || || || |||| | |||||| | Sbjct 27417 ATCTGGCCGACGGGTTTCCCATGGTCACGACTAAGAAGCTGCACTTAAAGTCCATCGTGC 27476 Query 37821 ATGAACTGCTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCG 37880 |||| ||||| ||||| | ||||| || || | |||| | | | ||||| | Sbjct 27477 ATGAGCTGCTCTGGTTCATCGCCGGCGACACAAATATTGCCTATCTCAAAGCAAATGGGG 27536 Query 37881 TGACGATTTGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGC 37940 ||| |||||||| || |||||||| || || || |||||||| || | || || | Sbjct 27537 TGAGCATTTGGGACGAATGGGCGGATGAGAAGGGTGATCTCGGGCCAGTCTATGGGCACC 27596 Query 37941 AATGGCGCTCGTGGAAGGGAGCAGACGGGAAAACCATCGACCAGATCGCATGGGTTGTCG 38000 | |||||| ||| | ||||| || || || |||||| | | | | Sbjct 27597 AGTGGCGCAGCTGGCCCACGCCCGACGGCGGCACGATTGATCAGATCAAAAACCTGATTG 27656 Query 38001 AAGAGATCAAACGAAATCCGCATTCACGCCGGCTGCTGGTGAGCGCTTGGAATGTAGCAG 38060 | ||||| | ||||| | || || |||||| | ||| || |||||||| || | Sbjct 27657 ACCAGATCGAGAATAATCCAGACTCCCGGCGGCTGATCGTGTCGGCCTGGAATGTGGCGG 27716 Query 38061 AATTGGACGAGATGAAGCTGCCGCCGTGTCATTACGCCTTTCAGTTCTATGTCGCCAACG 38120 | | || | ||| ||||||||| ||||| | || ||||||||||| || ||| Sbjct 27717 ACGTAGATAATATGGCGCTGCCGCCCTGTCACTGTCTGTTCCAGTTCTATGTGGCGGACG 27776 Query 38121 GCCGGTTGTCATGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAGGGTTGCCGTTTA 38180 || | | || ||| | | |||||||||| |||| ||| || || ||||||| | Sbjct 27777 GCAAGCTTTCCTGCCAGCTCTATCAGCGCTCCGCTGATGTGTTCTTGGGCGTGCCGTTCA 27836 Query 38181 ACATCGCGAGCTACGCGCTGTTGACGCATATGGTAGCCCA-ACAATGCGACTTGGATGTC 38239 ||||||| ||| |||||| | ||| ||| | || || | | | | | || || Sbjct 27837 ACATCGCCTCCTATGCGCTGCTCTTGCAGATGATGGCGCAGGTGACGGGGC-TCGAAGTG 27895 Query 38240 GGTGAACTCATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACAAGCG 38299 || || |||| ||| || || | ||| | || ||||||||||||||| || Sbjct 27896 GGCGAGTTCATCCACACTTTTGGGGATGCGCATCTCTATTCAAATCATCTGGAACAGACG 27955 Query 38300 AAACTGCAGCTGACGCGCGAGCCGCGCCCGCTGCCGAAGCTTGTGCTGAAACGGAAGCCG 38359 | ||||| || | || |||||||| | || || || | | || | | | | Sbjct 27956 GACCTGCAATTGTCTCGAGAGCCGCGTGCCCTTCCACAGATGAAAATCAATCCGGATGTG 28015 Query 38360 CCGTCTATCTTTGACTATGAATACGACGACTTTGAAATCGTCGGCTACGATCCGCATCCG 38419 | | ||||||| || || || || ||| | ||||||||||| || |||||| Sbjct 28016 AAGAGCCTGTTTGACTTCACTTATGATGATTTCGAACTGGTCGGCTACGACCCTCATCCG 28075 Query 38420 GCGATTAAAGCACCGGTGGCGGTTTA 38445 || ||| |||||||| ||||| Sbjct 28076 CACATCTCAGCGCCGGTGGCCGTTTA 28101 >seq6724 Length=1088 Score = 116 bits (128), Expect = 1e-21 Identities = 133/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 37769 GATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACTG 37828 ||||| |||||| | ||||| ||||||||| ||||| | ||||| ||| || ||||| | Sbjct 839 GATGGCTTTCCGTTGGTGACCACGAAAAAACTGCATCTGCGCTCAATCGTTCATGAATTA 780 Query 37829 CTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGTGACGATT 37888 | |||||||| || ||||| ||| || || | |||| ||||| || ||||| Sbjct 779 TTGTGGTTTTTGTCTGGTGATACCAACATCAAATACCTCAAGGAAAATGGTGTTTCGATT 720 Query 37889 TGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAATGGCG 37947 ||||| || ||||| ||||||||||| ||| | ||||| | || || |||||||| Sbjct 719 TGGGACGAATGGGCTGACGAAAACGGTGATTTGGGCCCTGTATATGGGCATCAATGGCG 661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130614283271050