Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_031903.1 Length=172345 Score E Sequences producing significant alignments: (Bits) Value seq8042 313 3e-80 seq9616 251 8e-62 seq15666 188 8e-43 seq10300 168 7e-37 >seq8042 Length=962 Score = 313 bits (346), Expect = 3e-80 Identities = 633/920 (69%), Gaps = 31/920 (3%) Strand=Plus/Minus Query 161623 GGCACGACTTTCGCTACGAGCTGGTATACCCATGGACTCGCTAGTTCCTATCTTGAGGG- 161681 ||||| || || | || || ||| || ||||| | || || || || | || || Sbjct 962 GGCACAACATTTGTCACAAGTTGGCTAACACATGGTTTGGCAAGCTCATACTTAGAAGGA 903 Query 161682 TGCAAATTTTCTTACAGCGGCAGTTAGCACTCCAGCTGACGCTATGGGTCATTCTCTTCT 161741 || || |||| | ||||| ||||||||||| |||||| | ||||| |||||||| || Sbjct 902 TGTAACTTTT-TAACAGCAGCAGTTAGCACACCAGCTAATAGCATGGGACATTCTCTACT 844 Query 161742 TCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGATCCAACTTGGGGGACT 161801 || | ||||| || || || ||||| |||| || || | |||| ||| || Sbjct 843 ACTATTGTGGGGACCAGAAGCACAAGGTTATTTTACAAGATGAAC---ACTTATGGG-CT 788 Query 161802 CT----GGAATTTTGTGGCGCTCCACGGGGCTTTCGCTCTGATTGGATTCATGCTTC-GT 161856 || ||| || | | | ||| || || | || || || || || | Sbjct 787 CTTTATGGACCTTCATTACTTTTCACTCAATCTTTGCAGTTATAGGCTTT-TGTTTAAGG 729 Query 161857 CAGTTTGAACTTGCTCGTCTTA-TCGGTATCCGTCCTTACAATGCTATTGCTTTCTCTGG 161915 |||||||| | || | |||| || |||| ||||| ||||||||| | || ||| | || Sbjct 728 CAGTTTGAGATAGCCAG-CTTAGTCAGTATACGTCCGTACAATGCTCTAGCCTTCACAGG 670 Query 161916 TCCTAT--TGCTGTTTTTGTCAGCGTCTTTCTCATATATCCTCTGGGACAGTCGTCCTGG 161973 ||||| | || | | |||| || | |||| || ||| | || || || || ||| Sbjct 669 CCCTATAATACTATACATATCAGTGT--TCGTCATTTACCCTTTAGGTCAATCCTCTTGG 612 Query 161974 TTCTTCGCGCCATCGTTTGGGGTTGCCGCTATTTTCAGGTTCTTACTTTTCCTACAAGGT 162033 ||||| || || | ||| ||||| || || ||||||||| | || ||||||||||| Sbjct 611 TTCTTTGCACCTAGCTATGGAGTTGCAGCCATCTTCAGGTTCCTCCTATTCCTACAAGGC 552 Query 162034 TTCCACAATTGGACGCTTAATCCGTTCCACATGATGGGTGTCGCAGGTATCTTGGGTGGT 162093 || ||||||||||| || || || ||||| |||||||| | ||||| |||||||| | Sbjct 551 TTTCACAATTGGACTCTAAACCCATTCCATATGATGGGAATAGCAGGAATCTTGGGAGCA 492 Query 162094 GCTTTGCTCTCTGCTATTCACGGTGTGACTGTTGAAAACACGCTCTACCAAGATGGTGAA 162153 ||| | | || ||||| || |||| || || | ||||| | || ||||||||| || Sbjct 491 GCTCTTTTATCAGCTATACATGGTGCCACAGTAGTTAACACTATATATCAAGATGGTCAA 432 Query 162154 -CAAGCAAATACTTTCAAGGCTTTTGACTCT---ACGCAAGAGGAGGAGACTTACTCGAT 162209 | || | || |||| | || |||| |||||| |||||||||||||| || Sbjct 431 GCTTACACA-ACCTTCAGATCATT---CTCTCCAACGCAACCTGAGGAGACTTACTCTAT 376 Query 162210 GGTTACTGCGAACCGTTTCTGGTCACAGATCTTCGGTATTGCTTTTAGTAATAAGCGTTG 162269 | | || || || | |||||||| || | |||| | || ||| |||||| | || Sbjct 375 GCTAACAGCTAATAGATTCTGGTCTCAAGTACTCGGAGTAGCATTTTCCAATAAGAGATG 316 Query 162270 GTTGCATTTCTTTATGCTCTTCGTTCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTAT 162329 | | || ||||| | || || || || || || | ||||| |||||| || || Sbjct 315 GCTTCACTTCTTCCTACTATTAGTACCAGTAGCAGGAATGTGGACCTCTTCTATAGGAAT 256 Query 162330 TATTGGACTCGCTCTTAATCTTCGTGCTTACGACTTTGTATCTCAGGAGATTCGTGCAGC 162389 || ||||| || | || ||| | || || |||||| ||||||||||| | || || Sbjct 255 AATAGGACTAGCATTCAACCTTAGAGCATATGACTTTATATCTCAGGAG-TAAAGGCTGC 197 Query 162390 GGAGGATCCTGAATTTGAAACCTTCTACACCAAGAATATCCTCTTGAATGAAGGTCTTCG 162449 ||||| || || ||||| || ||||| || ||||| || || | ||||||||| | || Sbjct 196 AGAGGACCCAGAGTTTGAGACATTCTATACTAAGAACATACTACTTAATGAAGGTATCCG 137 Query 162450 TGCATGGTTGGCA--CCAGTTGATCAACCGCATGAGAACTTTGTATTCCCTGAGGAAGTT 162507 | |||| ||||| ||| || ||||| ||||||||||| ||||||||||||||| Sbjct 136 TTTATGGATGGCAGTCCA--AGAACAACCTCATGAGAACTTCCAATTCCCTGAGGAAGTA 79 Query 162508 CTGCCTAGAGGTAACGCACT 162527 || || ||||| ||| |||| Sbjct 78 CTTCCAAGAGGCAACTCACT 59 >seq9616 Length=845 Score = 251 bits (278), Expect = 8e-62 Identities = 370/524 (71%), Gaps = 0/524 (0%) Strand=Plus/Plus Query 160262 GATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGCTTGTATTCCAAGCAGAA 160321 |||| |||||| || ||||| ||| || || |||| |||| | ||||||||||||||| Sbjct 26 GATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTATGTTAGTATTCCAAGCAGAA 85 Query 160322 CACAATATCCTTATGCATCCGTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCT 160381 |||| || | |||||||| |||||||| | || || || | || ||||| |||||| Sbjct 86 CACAGCATTTTAATGCATCCATTCCACATATTAGGAGTAGCAGCTGTTTTCGGAGGATCT 145 Query 160382 CTGTTCTCTGCTATGCATGGATCTCTGGTTACTTCTAGTCTCGTCAGAGAGACGACAGAA 160441 || ||| ||||||||||||||| |||| ||||| ||| | |||||| | | Sbjct 146 CTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCTCTACTTGCAGAGACACTTGGA 205 Query 160442 ACTGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAGGAAGAGACTTACAACATCGTC 160501 || | || | || | || || | ||||| || |||| ||||| || | ||| Sbjct 206 TCTAACTCACTCAATTCAGGCTATATATTCGGACAGTAGGATGAGACATATAGCATATCA 265 Query 160502 GCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGC 160561 ||||||||||| ||||| ||| | | || ||||| || ||||||||||||| | Sbjct 266 GCAGCACATGGATACTTTGGTAGACTAATATTCCAGTACAGTAGCTTTAACAACTCAAGA 325 Query 160562 TCTCTGCACTTCTTCCTCGCTGCTTGGCCTGTTGTTGGAATCTGGTTCACTGCCCTTGGT 160621 | ||||||||||| || || ||||| || | || || |||||||| | || || Sbjct 326 AGCATACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCACCTCTCTAGGA 385 Query 160622 GTTTCTACCATGGCATTCAATCTCAATGGTTTCAACTTCAACCAGTCCATCTTGGACAAC 160681 || ||||| ||||| || || | |||||| | ||||||||| | || | | ||| Sbjct 386 GTATCTACAATGGCTTTTAACTTAAATGGTCTGAACTTCAACGAATCACTTGTAGACTCA 445 Query 160682 CAAGGACAAGTTCTGAACACTTGGGCAGACGTGCTTAACCGCGCTGGTCTGGGCATGGAA 160741 |||| || | | ||||| ||||| ||| | ||||| | || | || || |||||| Sbjct 446 GAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCTAGGTATGGAA 505 Query 160742 GTCATGCACGAGCGTAACGCTCACAACTTCCCTCTCGACCTTGC 160785 || ||||| ||| | || || ||||||||||| || || || || Sbjct 506 GTAATGCATGAGAGGAATGCACACAACTTCCCACTAGATCTAGC 549 >seq15666 Length=534 Score = 188 bits (208), Expect = 8e-43 Identities = 351/513 (68%), Gaps = 3/513 (1%) Strand=Plus/Plus Query 160262 GATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTAT-ATGCTTGTATTCCAAGCAGA 160320 |||| |||||| || ||||| ||| || || |||| | ||| | |||||||||||||| Sbjct 22 GATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTTATGTTAGTATTCCAAGCAGA 81 Query 160321 ACACAATATCCTTATGCATCCGTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATC 160380 |||||| || | ||||| || |||||||| | || || || | || || || ||||| Sbjct 82 ACACAACATTTTAATGCACCCATTCCACATATTAGGAGTAGCAGCTGTTTTTGGAGGATC 141 Query 160381 TCTGTTCTCTGCTATGCATGGATCTCTGGTTACTTCTAGTCTCGTCAGAGAGACGACAGA 160440 ||| ||| ||||||||||||||| |||| ||||| ||| | |||||| | Sbjct 142 TCTATTCAGTGCTATGCATGGATCATTGGTCACTTCATCTCTACTTGCAGAGACACTTGG 201 Query 160441 AACTGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAGGAAGAGACTTACAACATCGT 160500 | || | || | || | || || | | | || ||||| ||||| || | ||| Sbjct 202 ATCTAACTCACTCAATTCAGGCTATATATGTGAACAGGAGGATGAGACATATAGCATATC 261 Query 160501 CGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACG 160560 ||||||||||| ||||| ||| | || ||||| || | ||||||||||||| | Sbjct 262 AGCAGCACATGGATACTTTGGTAGACCAATATTCCAGTACGGTAGCTTTAACAACTCAAG 321 Query 160561 CTCTCTGCACTTCTTCCTCGCTGCTTGGCCTGTTGTTGGAATCTGGTTCACTGCCCTTGG 160620 || ||||||||||| || || ||||| || | || || |||||||| | || || Sbjct 322 AAGCCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCACCTCTCTAGG 381 Query 160621 TGTTTCTACCATGGCATTCAATCTCAATGGTTTCAACTTCAACCAGTCCATCTTGGACAA 160680 | ||||| ||||| || || | |||| | | |||| | || | | ||| Sbjct 382 AGCATCTACGATGGCTTTTAACTTAAATG--TGAGCCCTCAATGAATCACTTGTAGACTC 439 Query 160681 CCAAGGACAAGTTCTGAACACTTGGGCAGACGTGCTTAACCGCGCTGGTCTGGGCATGGA 160740 ||| || | | ||||| ||||| ||| | ||||| | || | || || ||||| Sbjct 440 AGAAGATCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCTAGGTATGGA 499 Query 160741 AGTCATGCACGAGCGTAACGCTCACAACTTCCC 160773 ||| ||||| ||| | || || ||| ||||||| Sbjct 500 AGTAATGCATGAGAGGAATGCACACGACTTCCC 532 >seq10300 Length=803 Score = 168 bits (186), Expect = 7e-37 Identities = 286/413 (69%), Gaps = 1/413 (0%) Strand=Plus/Minus Query 160373 GGTGGATCTCTGTTCTCTGCTATGCATGGATCTCTGGTTACTTCTAGTCTCGTCAGAGAG 160432 || |||||||| ||| ||||||||||||||| |||| ||||| | || | ||| Sbjct 708 GGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTC-ATCCTACTTGCGGAG 650 Query 160433 ACGACAGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAGGAAGAGACTTAC 160492 || | | || | || | || | || || | ||||| || ||||| ||||| || Sbjct 649 ACACTTGGATCTAACTCACTCAATTCAGGCTATATATTCGGACAGGAGGATGAGACATAT 590 Query 160493 AACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCATCCTTTAAC 160552 | ||| ||||||||||| ||||| ||| | | || |||||||| | ||||||| Sbjct 589 AGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAATACGGTAGCTTTAAC 530 Query 160553 AACTCACGCTCTCTGCACTTCTTCCTCGCTGCTTGGCCTGTTGTTGGAATCTGGTTCACT 160612 |||||| | ||| ||||||||||| || || ||||| || | || || |||||||| Sbjct 529 AACTCAAGAAGTCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCACC 470 Query 160613 GCCCTTGGTGTTTCTACCATGGCATTCAATCTCAATGGTTTCAACTTCAACCAGTCCATC 160672 | || || || ||||| ||| | || || | ||||| | |||||||| | || | Sbjct 469 TCTCTAGGAGTATCTACAATGACTTTTAACTTAAATGGCCTGAACTTCAATGAATCACTT 410 Query 160673 TTGGACAACCAAGGACAAGTTCTGAACACTTGGGCAGACGTGCTTAACCGCGCTGGTCTG 160732 | ||| |||| || | | ||||| ||||| ||| | ||||| | || | || Sbjct 409 GTAGACTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCTA 350 Query 160733 GGCATGGAAGTCATGCACGAGCGTAACGCTCACAACTTCCCTCTCGACCTTGC 160785 || |||||||| ||||| ||| | || || ||| ||||||| || || || || Sbjct 349 GGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCCACTAGATCTAGC 297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 551261748000600