Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_031906.1 Length=198190 Score E Sequences producing significant alignments: (Bits) Value seq8042 311 1e-79 seq9616 230 3e-55 seq15666 197 2e-45 seq10300 150 2e-31 seq9663 89.7 7e-13 seq15657 84.2 3e-11 seq2646 82.4 1e-10 >seq8042 Length=962 Score = 311 bits (344), Expect = 1e-79 Identities = 461/648 (71%), Gaps = 9/648 (1%) Strand=Plus/Minus Query 190351 TCGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGC- 190409 || |||| ||||| ||||||||| | || ||| | || ||||| | | | || | Sbjct 706 TCAGTATACGTCCGTACAATGCTCTAGCCTTCACAGGCCCTATAA-TACTATACATATCA 648 Query 190410 GTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTCTTCGCGCCATCCTTCGGTGTG 190469 || || |||| |||||| | |||||||| ||||||||| || || || || || Sbjct 647 GTGTTCGTCATTTACCCTTTAGGTCAATCCTCTTGGTTCTTTGCACCTAGCTATGGAGTT 588 Query 190470 GCAGCGATCTTCCGCTTCCTCCTCTTCTTGCAGGGCTTCCATAACTGGACGCTGAACCCC 190529 ||||| |||||| | |||||||| ||| | || ||||| || || ||||| || ||||| Sbjct 587 GCAGCCATCTTCAGGTTCCTCCTATTCCTACAAGGCTTTCACAATTGGACTCTAAACCCA 528 Query 190530 TTCCACATGATGGGTGTTGCAGGTATCCTGGGAGGAGCACTACTGTCAGCAATCCATGGT 190589 ||||| |||||||| | ||||| ||| |||||| ||| || | ||||| || |||||| Sbjct 527 TTCCATATGATGGGAATAGCAGGAATCTTGGGAGCAGCTCTTTTATCAGCTATACATGGT 468 Query 190590 GTGACTGTAGAGAATACTTTGTATGAAGATGGTGAACAAGCAAACACG---TTTAAAGCA 190646 | || |||| || ||| | ||| |||||||| ||||| |||| || | | || Sbjct 467 GCCACAGTAGTTAACACTATATATCAAGATGGT---CAAGCTTACACAACCTTCAGATCA 411 Query 190647 TTCGACTCTACACAAGAGGAAGAGACCTATTCGATGGTCACTGCCAACCGTTTCTGGTCT 190706 ||| | || ||| || ||||| || || ||| | || || || | ||||||||| Sbjct 410 TTCTCTCCAACGCAACCTGAGGAGACTTACTCTATGCTAACAGCTAATAGATTCTGGTCT 351 Query 190707 CAAATCTTTGGTGTTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTCTTTGTT 190766 ||| | | || || || || |||||||| ||| | || ||||| | || || || Sbjct 350 CAAGTACTCGGAGTAGCATTTTCCAATAAGAGATGGCTTCACTTCTTCCTACTATTAGTA 291 Query 190767 CCTGTTATGGGTCTGTGGACTTCTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGT 190826 || || || ||||||| ||||| || || || || || || || |||||||| | Sbjct 290 CCAGTAGCAGGAATGTGGACCTCTTCTATAGGAATAATAGGACTAGCATTCAACCTTAGA 231 Query 190827 GCTTATGACTTTGTATCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTCGAGACTTTT 190886 || ||||||||| |||| || ||| || || ||||| || |||||||| ||||| || Sbjct 230 GCATATGACTTTATATCTCAGGAGTAAAG-GCTGCAGAGGACCCAGAGTTTGAGACATTC 172 Query 190887 TACACAAAAAATATACTTTTGAATGAAGGTCTTCGTTCATGGTTGGCACCTGTTGATCAA 190946 || || || || ||||| | ||||||||| | |||| |||| ||||| || ||| Sbjct 171 TATACTAAGAACATACTACTTAATGAAGGTATCCGTTTATGGATGGCAGTCCAAGAACAA 112 Query 190947 CCCCATGAGAATTTTGTATTTCCAGAAGAAGTATTGCCAAGAGGCAAC 190994 || |||||||| || ||| || || |||||| | |||||||||||| Sbjct 111 CCTCATGAGAACTTCCAATTCCCTGAGGAAGTACTTCCAAGAGGCAAC 64 >seq9616 Length=845 Score = 230 bits (254), Expect = 3e-55 Identities = 379/544 (70%), Gaps = 2/544 (0%) Strand=Plus/Plus Query 189292 GGTCAAGGTTCTTTCTCTGACGCAATGCCCTTGGGTATCAGTGGAACCTTCAACTACATG 189351 || ||||| |||| ||| | ||||| | ||||| |||||||||||||||| ||| Sbjct 8 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTATG 67 Query 189352 CTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACATGCTGGGAGTCGCA 189411 | || ||||||||||| |||| ||| | ||||| || |||||||| | ||||| ||| Sbjct 68 TTAGTATTCCAAGCAGAACACAGCATTTTAATGCATCCATTCCACATATTAGGAGTAGCA 127 Query 189412 GGTGTCTTCGGTGGTTCACTGTTCTCCGCAATGCATGGTTCACTCGTTACCTCTTCACTG 189471 | ||| ||||| || || || ||| || |||||||| ||| | || || || || || Sbjct 128 GCTGTTTTCGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCTCTA 187 Query 189472 GTTCGTGAAACCACTGAAACCGAGTCCCAGAACTATGGTTACAAGTTTGGACAAGAAGAA 189531 || || || || | | | || | || | || || | || ||||| | || Sbjct 188 CTTGCAGAGACACTTGGATCTAACTCACTCAATTCAGGCTATATATTCGGACAGTAGGAT 247 Query 189532 GAAACGTACAACATCGTTGCTGCTCATGGATATTTCGGTCGTCTTATCTTCCAATAT-GC 189590 || || || | ||| || || |||||||| || ||| | || || ||||| || | Sbjct 248 GAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAGTACAGT 307 Query 189591 ATCGTTCAACAACTCCCGTTCACTTCACTTCTTCCTCGCTGCCTGGCCAGTCGTGGGTAT 189650 | | || |||||||| | | ||||||||||| || || |||||||| | ||||| Sbjct 308 AGCTTT-AACAACTCAAGAAGCATACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTAT 366 Query 189651 CTGGTTTACCGCCCTCGGCGTCAGCACCATGGCATTCAACCTCAATGGGTTCAACTTCAA 189710 ||||| ||| | || || || || ||||| || ||| | ||||| | |||||||| Sbjct 367 ATGGTTCACCTCTCTAGGAGTATCTACAATGGCTTTTAACTTAAATGGTCTGAACTTCAA 426 Query 189711 TCAATCCATTCTTGATGGTCAAGGTCGTGTTCTGAACACATGGGCAGACGTTCTCAACCG 189770 |||| || | || |||||| | | | ||||||||||| ||| | || || | Sbjct 427 CGAATCACTTGTAGACTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAG 486 Query 189771 TGCTGGTCTTGGTATGGAAGTCATGCATGAGCGTAACGCTCACAACTTCCCTCTTGATCT 189830 || | || ||||||||||| ||||||||| | || || ||||||||||| || ||||| Sbjct 487 AGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACAACTTCCCACTAGATCT 546 Query 189831 GGCA 189834 ||| Sbjct 547 AGCA 550 >seq15666 Length=534 Score = 197 bits (218), Expect = 2e-45 Identities = 366/532 (69%), Gaps = 5/532 (1%) Strand=Plus/Plus Query 189292 GGTCAAGGTTCTTTCTCTGACGCAATGCCCTTGGGTATCAGTGGAACCTTCAACTAC-AT 189350 || ||||| |||| ||| | ||||| | ||||| |||||||||||||||| || Sbjct 4 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTTAT 63 Query 189351 GCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACATGCTGGGAGTCGC 189410 | | || ||||||||||| |||||||| | |||||||| |||||||| | ||||| || Sbjct 64 GTTAGTATTCCAAGCAGAACACAACATTTTAATGCACCCATTCCACATATTAGGAGTAGC 123 Query 189411 AGGTGTCTTCGGTGGTTCACTGTTCTCCGCAATGCATGGTTCACTCGTTACCTCTTCACT 189470 || ||| || || || || || ||| || |||||||| ||| | || || || || || Sbjct 124 AGCTGTTTTTGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTCACTTCATCTCT 183 Query 189471 GGTTCGTGAAACCACTGAAACCGAGTCCCAGAACTATGGTTACAAGTTTGGACAAGAAGA 189530 || || || || | | | || | || | || || | | || ||| || || Sbjct 184 ACTTGCAGAGACACTTGGATCTAACTCACTCAATTCAGGCTATATATGTGAACAGGAGGA 243 Query 189531 AGAAACGTACAACATCGTTGCTGCTCATGGATATTTCGGTCGTCTTATCTTCCAATATGC 189590 || || || | ||| || || |||||||| || ||| | | || ||||| || | Sbjct 244 TGAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACCAATATTCCAGTACGG 303 Query 189591 ATCGTTCAACAACTCCCGTTCACTTCACTTCTTCCTCGCTGCCTGGCCAGTCGTGGGTAT 189650 || |||||||| | || ||||||||||| || || |||||||| | ||||| Sbjct 304 TAGCTTTAACAACTCAAGAAGCCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTAT 363 Query 189651 CTGGTTTACCGCCCTCGGCGTCAGC-ACCATGGCATTCAACCTCAATGGGTTCAACTTCA 189709 ||||| ||| | || || | || | || ||||| || ||| | |||| | | | ||| Sbjct 364 ATGGTTCACCTCTCTAGGAG-CATCTACGATGGCTTTTAACTTAAATGTGAGC--CCTCA 420 Query 189710 ATCAATCCATTCTTGATGGTCAAGGTCGTGTTCTGAACACATGGGCAGACGTTCTCAACC 189769 || |||| || | || ||| || | | | ||||||||||| ||| | || || Sbjct 421 ATGAATCACTTGTAGACTCAGAAGATCATCTAATTAACACATGGGCCGACATACTTAATA 480 Query 189770 GTGCTGGTCTTGGTATGGAAGTCATGCATGAGCGTAACGCTCACAACTTCCC 189821 | || | || ||||||||||| ||||||||| | || || ||| ||||||| Sbjct 481 GAGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCC 532 >seq10300 Length=803 Score = 150 bits (166), Expect = 2e-31 Identities = 224/318 (70%), Gaps = 0/318 (0%) Strand=Plus/Minus Query 189517 TTTGGACAAGAAGAAGAAACGTACAACATCGTTGCTGCTCATGGATATTTCGGTCGTCTT 189576 || ||||| || || || || || | ||| || || |||||||| || ||| | || Sbjct 613 TTCGGACAGGAGGATGAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACTA 554 Query 189577 ATCTTCCAATATGCATCGTTCAACAACTCCCGTTCACTTCACTTCTTCCTCGCTGCCTGG 189636 || |||||||| | || |||||||| | || ||||||||||| || || ||| Sbjct 553 ATATTCCAATACGGTAGCTTTAACAACTCAAGAAGTCTACACTTCTTCCTAGCAGCATGG 494 Query 189637 CCAGTCGTGGGTATCTGGTTTACCGCCCTCGGCGTCAGCACCATGGCATTCAACCTCAAT 189696 ||||| | ||||| ||||| ||| | || || || || ||| | || ||| | ||| Sbjct 493 CCAGTAATAGGTATATGGTTCACCTCTCTAGGAGTATCTACAATGACTTTTAACTTAAAT 434 Query 189697 GGGTTCAACTTCAATCAATCCATTCTTGATGGTCAAGGTCGTGTTCTGAACACATGGGCA 189756 || | ||||||||| |||| || | || |||||| | | | ||||||||||| Sbjct 433 GGCCTGAACTTCAATGAATCACTTGTAGACTCAGAAGGTCATCTAATTAACACATGGGCC 374 Query 189757 GACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCATGAGCGTAACGCTCACAAC 189816 ||| | || || | || | || ||||||||||| ||||||||| | || || ||| || Sbjct 373 GACATACTTAATAGAGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACGAC 314 Query 189817 TTCCCTCTTGATCTGGCA 189834 ||||| || ||||| ||| Sbjct 313 TTCCCACTAGATCTAGCA 296 >seq9663 Length=843 Score = 89.7 bits (98), Expect = 7e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 189258 AGCAGCATCCGCAGTCTTTCTGGTCTATCCTTTTGGTCAAGGTTCTTTCTCTGACGCAAT 189317 ||||||||| ||||| || | || || ||| | || ||||| |||| ||| | || Sbjct 207 AGCAGCATCAGCAGTATTCATTGTTTACCCTATAGGACAAGGAAGTTTCAGTGATGGTAT 266 Query 189318 GCCCTTGGGTATCAGTGGAACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACAT 189377 ||| | ||||| ||||||||||| |||| | | | || | |||||| || |||||||| Sbjct 267 GCCACTAGGTATTAGTGGAACCTTTAACTTTACGTTCGTATGCCAAGCGGAACACAACAT 326 Query 189378 CCTGATGCACCCCTTCCAC 189396 || ||||||| |||||| Sbjct 327 GCTCGTGCACCCATTCCAC 345 >seq15657 Length=537 Score = 84.2 bits (92), Expect = 3e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 189258 AGCAGCATCCGCAGTCTTTCTGGTCTATCCTTTTGGTCAAGGTTCTTTCTCTGACGCAAT 189317 ||||||||| ||||| || | || || ||| | || ||||| |||| ||| | || Sbjct 22 AGCAGCATCAGCAGTATTCATTGTTTACCCTATAGGACAAGGAAGTTTCAGTGATGGTAT 81 Query 189318 GCCCTTGGGTATCAGTGGAACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACA 189373 ||| | ||||| |||||||||||||||| ||| | || ||||||||||| |||| Sbjct 82 GCCACTAGGTATTAGTGGAACCTTCAACTTTATGTTAGTATTCCAAGCAGAACACA 137 >seq2646 Length=2093 Score = 82.4 bits (90), Expect = 1e-10 Identities = 60/69 (87%), Gaps = 2/69 (3%) Strand=Plus/Minus Query 18728 GGTGTGGCGGAATTGGTAGACGCGCCAGGTTTAGGTTCTGGTGTCTTTATGACGTGGAGG 18787 ||||||||||||||||||||||| |||| |||||||||||| | ||| || ||||| || Sbjct 1915 GGTGTGGCGGAATTGGTAGACGCACCAGATTTAGGTTCTGGCGCCTT--TGGCGTGGGGG 1858 Query 18788 TTCAAGTCC 18796 ||| ||||| Sbjct 1857 TTCGAGTCC 1849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633948610698000