Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq2399 109 8e-19 seq14874 84.2 3e-11 >seq2399 Length=2249 Score = 109 bits (120), Expect = 8e-19 Identities = 345/532 (65%), Gaps = 2/532 (0%) Strand=Plus/Minus Query 162307 CAACCAGATGAAATATATAACCTAGGGGCTCAGAGTCACGTTAAGGTTTCATTTGATCAG 162366 || |||||||||||||| || || | || || ||||| |||||||| ||||| Sbjct 1003 CAGCCAGATGAAATATACAATCTCGCTGCACAAAGTCATGTTAAGGTAAGCTTTGAAACA 944 Query 162367 CCTGAATACACAGCACAGACCGACGCATTGGGCACTCTAAGGGTGCTAGAAGCCGTCCGT 162426 || || || || ||| | | || || | || || ||||||||||| ||||| | || Sbjct 943 CCCGAGTATACTGCAAATTCAGATGCCATCGGAACACTAAGGGTGCTGGAAGCAATTCGG 884 Query 162427 CTTCTTGGTATGGAATCATACGTAAGAATCTACCAAGCGAGCACCAGTGAGCTTTATGGG 162486 | ||| | | || |||| | | |||||||| ||| || || || || Sbjct 883 ATCCTTAATTTAGAGAGCCGCGTACGTTTTTACCAAGCCTCAACCTCCGAACTCTACGGC 824 Query 162487 CTAGTTCAGGAGACACCCCAGAAAGAAACCACTCCAATGTATCCACGATCCCCTTATGGA 162546 |||| || || ||||||| ||| || ||| | |||||| | || || || Sbjct 823 GATGTTCGCGAAACGCCCCAGACCGAATTGACGCCATTTTATCCAAGGAGTCCGTACGGC 764 Query 162547 GTTGCTAAACTATATGGGTTCTGGATCATCAAAAACTACAGGGAAAGCTATGACATACAT 162606 | || || ||||| ||||||||||| | ||||| | ||| || | || ||| Sbjct 763 GCAGCCAAGGCATATGCGTTCTGGATCACCGTTAACTATCGCGAAGCATACGGGATCCAT 704 Query 162607 GCCTCTAGCGGTATTCTATTCAATCACGAAAGCTC-ACGCAGAGGAGAGACGTTCGTCAC 162665 || |||| ||| ||| ||||||| || || || | |||| |||| || ||||| || || Sbjct 703 GCTTCTAACGGCATTTTATTCAACCATGAGGGCCCAACGC-GAGGCGAAACGTTTGTAAC 645 Query 162666 ACGCAAGATCGTCCGAGCCTTGTCCCGAATTAGTGTGGGACTCCAAAGTGATCTACAACT 162725 ||| || ||| || || | || |||| |||| | ||| | || || Sbjct 644 ACGGAAAATCACTCGCGCGGTTGCCGCAATTCACTTGGGGCACCAGTCAAAACTGTTTCT 585 Query 162726 TGGAAACCTCAATGCCCGACGTGACTGGGGACACGCCAAAGACTACGTAGAGGCTATGTG 162785 ||| || || || | || || ||||| || || || || || || | |||||| Sbjct 584 TGGTAATCTAGATTCGAAGCGCGATTGGGGGCATGCACGCGATTATGTGGAAGGTATGTG 525 Query 162786 GTTGATGCTTCAGCAAGAGAAGCCAGATGATTATGTGATCGCAACTGGTGAG 162837 | || | ||||| || ||||| |||||||| ||| | || || || ||| Sbjct 524 GCGTATCGTCCAGCAGGACAAGCCCGATGATTACGTGCTGGCCACCGGCGAG 473 >seq14874 Length=573 Score = 84.2 bits (92), Expect = 3e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 142790 TTCGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAACGGTTCG 142849 ||||||| ||||||||| ||| ||||| ||||||||||||||||| |||| ||||||| Sbjct 502 TTCGGGGCCTTAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGGGTCAGCGGTTCG 443 Query 142850 AGTCCGTTATTCTCCACCA 142868 | ||| || |||||||| Sbjct 442 ATCCCGCTAGGCTCCACCA 424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691315921010520