Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcocystis_20neurona_20[genbank_20GCA_5F000727475.1_202014-07-15] 871 sequences; 124,404,968 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq819 268 2e-69 >seq819 Length=547 Score = 268 bits (296), Expect = 2e-69 Identities = 215/254 (85%), Gaps = 4/254 (2%) Strand=Plus/Minus Query 67 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT-TTGC-TCGAATACAT 124 |||||| ||||||||| |||||||||||||| |||||||| | |||| | |||||| Sbjct 352 CAGGACCGTTACTTTGAGAAAATTAGAGTGTTTCAAGCAGGCTTGTTGCCTTGAATACTG 293 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 |||||||||||| | |||||| | ||||||||||||||||||||||||||| | || Sbjct 292 CAGCATGGAATAACAAGATAGGATTT-CGGTTCTATTTTGTTGGTTTCTAGGACTGAAGT 234 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||| ||| ||||| | ||||| || ||||||||||||||||||| | Sbjct 233 AATGATTAATAGGGACAGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTAG 174 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 |||| || ||||| ||||||||||||||| || |||| ||||||||||||||||| || Sbjct 173 ATTTGTTAAAGACGAACTACTGCGAAAGCATTTGCCAAAGATGTTTTCATTAATCA-AGA 115 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 114 ACGAAAGTTAGGGG 101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915192028608