Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcocystis_20neurona_20[genbank_20GCA_5F000727475.1_202014-07-15] 871 sequences; 124,404,968 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq67 230 5e-58 >seq67 Length=30047 Score = 230 bits (254), Expect = 5e-58 Identities = 267/355 (75%), Gaps = 19/355 (5%) Strand=Plus/Minus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 ||||| || | ||| | |||||||||| | | | | |||||||| ||| ||||| | Sbjct 4492 ATCTTTACAGACATTTCTATTTCACCGAATTTTTCTTAAAGACAGTGTTCAAGTCGTTTC 4433 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 4432 ACCTTTCGTGCGGGTCGGAACTTACCCGACAATGAATTTCGCTACCTTAGGACCGTTATA 4373 Query 129 GTTACGGCCGCCGTTTACTGGGGCTT------AAGTTCACTGCTTCGATTGCTCTAACAG 182 ||||| ||||||||||||| | |||| || || ||| ||| | ||| | Sbjct 4372 GTTACAGCCGCCGTTTACTAGAGCTTATAAAAAAATTATCTG----TATTAC-ATAAAAA 4318 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAG-CTCCTATACATCGTCTTGCGACTT 241 | ||||| | | ||||| ||||||| ||||| |||| ||| |||| | |||| Sbjct 4317 TTTTTTTTAACTTACTAGCACTGGGCAGGTGTCAGTATCCT-TACTTCGTAATTACACTT 4259 Query 242 AGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATA 301 || || ||||||||||||| |||||||||||||| | | || ||| ||| || Sbjct 4258 TGCGGATACCTGTGTTTTTGATAAACAGTCGCTTGAACTTTTTAATTGCAGCC-CTC--- 4203 Query 302 GACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAA 356 ||||| ||||| |||| ||||||| || | |||||||||||||||||| || Sbjct 4202 --TAGGCATCCCTTATCCCGAAGTTACAGGATTGTTTTGCCGAGTTCCTTAAAAA 4150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062390746496