Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcocystis_20neurona_20[genbank_20GCA_5F000727475.1_202014-07-15] 871 sequences; 124,404,968 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq819 154 2e-35 >seq819 Length=547 Score = 154 bits (170), Expect = 2e-35 Identities = 150/188 (80%), Gaps = 4/188 (2%) Strand=Plus/Minus Query 6 CAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGC-TCGAATACAT 63 |||||| ||||||||| |||||||||| ||| |||||||| | |||| | |||||| Sbjct 352 CAGGACCGTTACTTTGAGAAAATTAGAGTGTTTCAAGCAGGCTTGTTGCCTTGAATACTG 293 Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG 123 | |||||||||| | |||||| | |||||||||||||| |||||||||||| | | Sbjct 292 CAGCATGGAATAACAAGATAGGATTT-CGGTTCTATTTTGTTGGTTTCTAGGACTGAA-G 235 Query 124 TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183 ||||||| |||| ||| ||| ||||| | ||||| || ||||| ||||||||||||| Sbjct 234 TAATGATTAATAGGGACAGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTA 175 Query 184 GATTTATT 191 ||||| || Sbjct 174 GATTTGTT 167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511995679840