Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcocystis_20neurona_20[genbank_20GCA_5F000727475.1_202014-07-15] 871 sequences; 124,404,968 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq67 183 5e-44 >seq67 Length=30047 Score = 183 bits (202), Expect = 5e-44 Identities = 201/263 (76%), Gaps = 6/263 (2%) Strand=Plus/Minus Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTT--GGC 74 |||| |||| ||||| |||| | |||||||||| | |||| | |||| | Sbjct 5207 CTTATATGCTTTCAGTAGTTATTTTTATTAAACTTAGCTACTCAGCAAAATACTTTTGAT 5148 Query 75 AGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAA-GGACAGCTC 133 | | ||||| |||| |||||| | | |||||||||||||||| ||| | | Sbjct 5147 AAAATAACTGAAATACCATAGGTTTAATCTCCTTGGTCCTCTCGTACTAAAGGAAA--TA 5090 Query 134 CTCTCAAAT-TTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAA 192 || | ||| ||| || | || |||||| ||||||||||||||| |||||||||||| Sbjct 5089 CTTTACAATATTCTTATGTTTACATCGGATACGGACCGAACTGTCTCACGACGTTCTGAA 5030 Query 193 CCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCC 252 |||||||| |||||| ||||||||||||||||| |||||||||| ||||| || ||||| Sbjct 5029 CCCAGCTCACGTGCCGCTTTAATGGGCGAACAGACCAACCCTTGAGACCTGCTACAGCCT 4970 Query 253 CAGGATGAGACGAGCCGACATCG 275 ||||||| ||||||||||||||| Sbjct 4969 CAGGATGCGACGAGCCGACATCG 4947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780793411756