Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcocystis_20neurona_20[genbank_20GCA_5F000727475.1_202014-07-15] 871 sequences; 124,404,968 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq67 84.2 5e-14 >seq67 Length=30047 Score = 84.2 bits (92), Expect = 5e-14 Identities = 108/148 (73%), Gaps = 1/148 (1%) Strand=Plus/Plus Query 48 TCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCG 107 ||| |||||||| |||| || |||||||||||||||||||| ||||||| | | | Sbjct 1575 TCAAGCTTGCGCTTATTGCAGAAAATTCCCCACTGCTGCCTCCCTTAGGAGTTAGAGCTG 1634 Query 108 TGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGT 167 | | ||| | | |||||||| || ||| ||| |||||| ||| |||||| ||| Sbjct 1635 TATTTCAATCTCTATGTGGCTGTTCCCCCTATCAAGGCAGCTACTAATCTTCGCCTTGGT 1694 Query 168 -GGGCCATTACCCCGCCAACTAGCTAAT 194 | ||||| | ||||||||||||| Sbjct 1695 AAAACTATTACTTCACCAACTAGCTAAT 1722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222389352896