Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcocystis_20neurona_20[genbank_20GCA_5F000727475.1_202014-07-15] 871 sequences; 124,404,968 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq67 159 1e-36 >seq67 Length=30047 Score = 159 bits (176), Expect = 1e-36 Identities = 243/339 (72%), Gaps = 14/339 (4%) Strand=Plus/Minus Query 164 TCTGATTAGCTAGTTGGTAAGGTAACGGCTT-ACCAAGGCGACGATCAGTAGCCGACCTG 222 ||| |||||||||||||| | |||| | || |||||||||| ||| |||||| | | || Sbjct 1726 TCTAATTAGCTAGTTGGTGAAGTAATAGTTTTACCAAGGCGAAGATTAGTAGCTGCCTTG 1667 Query 223 AGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAG 282 | |||| || | ||||||| | | ||| | || | | |||||||| |||||||||||| Sbjct 1666 ATAGGGGGAACAGCCACATAGAGATTGAAATACAGCTCTAACTCCTAAGGGAGGCAGCAG 1607 Query 283 TGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGG 342 |||||||| || |||| || |||| ||| ||| | | ||||| || ||| | Sbjct 1606 TGGGGAATTTTCTGCAATAAGCGCAAGCTTGACAGAGCGTCATCACGTGAAGGAGGAAAG 1547 Query 343 CC--TTCGGGTCGTAAAGCTC-TGTCCTCAAGGAAGATAATG---ACGGTACTTGAGG-- 394 || | ||| ||||| || | | || | || |||||| || | || | | Sbjct 1546 CCTATATAGGTTGTAAACTTCTTTTGCTTA---AATATAATGAATACTGACGTTTAAGTT 1490 Query 395 -AGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTA 453 | ||| ||||||||| |||||||||||||||||||||||| || | ||||||| Sbjct 1489 TAAAAAGTATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGGGGATACGAGCGTTA 1430 Query 454 TCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTT 492 ||| ||| ||| |||||||||| || |||||||| || Sbjct 1429 TCCAAAATGACT-GGGCGTAAAGTGTATGTAGGTGGGTT 1392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497586955904