Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcocystis_20neurona_20[genbank_20GCA_5F000727475.1_202014-07-15] 871 sequences; 124,404,968 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq67 136 1e-29 >seq67 Length=30047 Score = 136 bits (150), Expect = 1e-29 Identities = 229/329 (70%), Gaps = 2/329 (1%) Strand=Plus/Minus Query 19 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTA 78 ||||||||| |||||||||||||||||||||||| || | |||||||||| ||| | Sbjct 1479 CGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGGGGATACGAGCGTTATCCAAAATGA 1420 Query 79 CTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTA-TGGCTCAA 137 |||||||||||| || |||||||| || || || | |||| ||| | | | || Sbjct 1419 CTGGGCGTAAAGTGTATGTAGGTGGGTTAGTATGTTCTTACTTAAAGACTATTTGATAAA 1360 Query 138 CCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTA 197 | | | | ||||| || |||| | ||||| ||| |||||| | Sbjct 1359 CTTAGAAAAAG-AAAGAAAACTATTAACCTTGAGTTCGATAGGGGTAAGAGGAATTTTTT 1301 Query 198 GTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGG 257 | | || |||||||||| ||||| | | ||| |||| ||||| || ||| |||| Sbjct 1300 GAGAAGTAGTGAAATGCGAAGATACAAAAAAGAAGACCAACAGCGAAAGCATCTTACTGG 1241 Query 258 ACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTA 317 | |||||||||||| |||||| ||||||||| ||||||||||||| ||| Sbjct 1240 GTCGATACTGACACTGAGATACGAAAGTTAAGGGAGCAAATGGGATTAGATACCCCAGTA 1181 Query 318 GTCCACGCCGTAAACGATGAATACTAGGT 346 ||| | |||||| ||| ||||| ||| Sbjct 1180 GTCTTAACTGTAAACAATGGATACTCGGT 1152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203189520128