Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcocystis_20neurona_20[genbank_20GCA_5F000727475.1_202014-07-15] 871 sequences; 124,404,968 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq769 96.9 6e-18 >seq769 Length=583 Score = 96.9 bits (106), Expect = 6e-18 Identities = 95/119 (80%), Gaps = 3/119 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | ||| || || ||||| ||||||| ||| || ||| Sbjct 230 GTACGAGAGGAACAGTTGG-TTCGGA-TACTTGGTAAATGCGGCTAGTTGAAAAGCTAGT 173 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTC-TAAGTCAGAATCCATGC 118 ||||||| ||||||||| | ||||| ||| ||||||||||| ||||||||||||||||| Sbjct 172 GCCGCGACGCTACCATCCGTTGGATAATGACTGAACGCCTCTTAAGTCAGAATCCATGC 114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819193087744