Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcocystis_20neurona_20[genbank_20GCA_5F000727475.1_202014-07-15] 871 sequences; 124,404,968 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq348 98.7 3e-18 >seq348 Length=1178 Score = 98.7 bits (108), Expect = 3e-18 Identities = 115/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 345 CATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACG 404 || ||||| | |||| |||||||| | |||||| | || || ||| ||||||||||| Sbjct 981 CACGTATTGGGCATAGATTTACCACGATGATCCATCTCGTGAG-TACCATCAAATAAACT 1039 Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATG 464 | || ||||||||||| |||||||| || | |||| | ||||| |||||| | || Sbjct 1040 ACGGTTGCTTTAATGAGCCCTTCGCAGTCTCGCGATATA-AAAGCTTACACTTAGCCGTG 1098 Query 465 CATGGCTTAATCTTTGAGACAAGCATATGACTA 497 |||| ||| ||| |||| |||||| ||||| Sbjct 1099 CATGATTTAGCCTTCAAGACCAGCATACGACTA 1131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510386844416