Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcocystis_20neurona_20[genbank_20GCA_5F000875885.1_202015-02-13] 2,862 sequences; 130,023,008 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq699 282 6e-74 seq658 174 2e-41 seq14 167 4e-39 >seq699 Length=1384 Score = 282 bits (312), Expect = 6e-74 Identities = 204/232 (88%), Gaps = 3/232 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || ||| |||| | ||||| |||| ||||||| ||| | Sbjct 698 GTACAAAGGGCAGGGACGTAATCGGCGCAAGCT-GCTGACTTGCGCCTACTAGGCATT-C 755 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119 ||||||||||| || ||||||||| ||||||||||||||||||| | ||||| |||| Sbjct 756 CTCGTTGAAGATTAATAATTGCAATAATCTATCCCCATCACGATGCATACTCAAAAGATT 815 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||| ||||||||||||||||| || |||||||| || |||||||||||||||||||| Sbjct 816 ACCTAGACCTGTCGGCCAAGGTTGTAAACTCGTTGGATGCATCAGTGTAGCGCGCGTGCA 875 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 ||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 876 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTG 927 >seq658 Length=1433 Score = 174 bits (192), Expect = 2e-41 Identities = 182/234 (78%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||| ||||| ||||| ||| |||||| |||||| | Sbjct 1037 GTACAAAGGGCAGGGACTTAATCAACGCAAGCTT-ATGACCCGCACTTACTGGGAATT-C 980 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || ||||||||| | ||||||||||||| ||||| | || Sbjct 979 CTCGTTCATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTT 920 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| |||| |||| ||| | || || ||| |||||||||||||||||| Sbjct 919 ACCCGCGCCTGCCGGCGTAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCA 860 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 859 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 807 >seq14 Length=3117802 Score = 167 bits (184), Expect = 4e-39 Identities = 179/233 (77%), Gaps = 3/233 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||| |||||||||| || ||| ||| | | ||| |||| ||||| ||| | Sbjct 150242 GTACAAAAAACAGGGACGTAATCGGCGCAGGCT-GCTAACTTGCGCCCACTAGACATT-C 150299 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGAT-T 119 ||||||||||| || |||||||| | ||||| ||||||||| | ||||| | | Sbjct 150300 CTCGTTGAAGATTAATAATTGCAACACCCCATCCCAATCACGATGCATACTCAAAAAAGT 150359 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||| | |||||||||||||| || |||| || || | ||||||| |||||||||| Sbjct 150360 ACCTATATCTGTCGGCCAAGGTTGTAAACTCACTGGATGCTTCAGTGTGGCGCGCGTGCA 150419 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGG 232 ||||||||||||||| |||||| | |||||||||||| |||| ||||| ||| Sbjct 150420 GCCCAGAACATCTAACGGCATCGCCGACCTGTTATTGTCTCACGCTTCCTTGG 150472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751979150330