Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcocystis_20neurona_20[genbank_20GCA_5F000875885.1_202015-02-13] 2,862 sequences; 130,023,008 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq86 136 1e-29 >seq86 Length=38152 Score = 136 bits (150), Expect = 1e-29 Identities = 195/271 (72%), Gaps = 3/271 (1%) Strand=Plus/Minus Query 11 CTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCG 70 ||| ||||| |||| ||||| ||||||| || | | | |||||| | ||| Sbjct 19528 CTGTATCTTTACAGACATTTCTATTTCACCGAATTTTTCTTAAAGACAGTGTTCAAGTCG 19469 Query 71 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 130 || | || ||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct 19468 TTTCACCTTTCGTGCGGGTCGGAACTTACCCGACAATGAATTTCGCTACCTTAGGACCGT 19409 Query 131 TATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTC-GCGTTAGCTAACCCC 189 ||| ||||| |||||||||||| | |||| | || | || | ||| ||| Sbjct 19408 TATAGTTACAGCCGCCGTTTACTAGAGCTTATAAAAAAATTATCTGTATTACATAAAAAT 19349 Query 190 ATCAATTAACCTTCCGGCACCGGGCAGGCGTCA-CACCCTATACGTCCACTTTCGTGTTT 248 | ||||| | | |||| ||||||| |||| | ||| ||| || || ||| Sbjct 19348 TTTTTTTAACTTACTAGCACTGGGCAGGTGTCAGTATCCT-TACTTCGTAATTACACTTT 19290 Query 249 GCAGAGTGCTGTGTTTTTAATAAACAGTCGC 279 || || |||||||||| |||||||||||| Sbjct 19289 GCGGATACCTGTGTTTTTGATAAACAGTCGC 19259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260763915904