Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcocystis_20neurona_20[genbank_20GCA_5F000875885.1_202015-02-13] 2,862 sequences; 130,023,008 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq86 230 5e-58 >seq86 Length=38152 Score = 230 bits (254), Expect = 5e-58 Identities = 267/355 (75%), Gaps = 19/355 (5%) Strand=Plus/Minus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 ||||| || | ||| | |||||||||| | | | | |||||||| ||| ||||| | Sbjct 19524 ATCTTTACAGACATTTCTATTTCACCGAATTTTTCTTAAAGACAGTGTTCAAGTCGTTTC 19465 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 19464 ACCTTTCGTGCGGGTCGGAACTTACCCGACAATGAATTTCGCTACCTTAGGACCGTTATA 19405 Query 129 GTTACGGCCGCCGTTTACTGGGGCTT------AAGTTCACTGCTTCGATTGCTCTAACAG 182 ||||| ||||||||||||| | |||| || || ||| ||| | ||| | Sbjct 19404 GTTACAGCCGCCGTTTACTAGAGCTTATAAAAAAATTATCTG----TATTAC-ATAAAAA 19350 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAG-CTCCTATACATCGTCTTGCGACTT 241 | ||||| | | ||||| ||||||| ||||| |||| ||| |||| | |||| Sbjct 19349 TTTTTTTTAACTTACTAGCACTGGGCAGGTGTCAGTATCCT-TACTTCGTAATTACACTT 19291 Query 242 AGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATA 301 || || ||||||||||||| |||||||||||||| | | || ||| ||| || Sbjct 19290 TGCGGATACCTGTGTTTTTGATAAACAGTCGCTTGAACTTTTTAATTGCAGCC-CTC--- 19235 Query 302 GACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAA 356 ||||| ||||| |||| ||||||| || | |||||||||||||||||| || Sbjct 19234 --TAGGCATCCCTTATCCCGAAGTTACAGGATTGTTTTGCCGAGTTCCTTAAAAA 19182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062369594112