Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcocystis_20neurona_20[genbank_20GCA_5F000875885.1_202015-02-13] 2,862 sequences; 130,023,008 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq658 91.5 9e-17 seq699 73.4 2e-11 >seq658 Length=1433 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 1077 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 1020 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 1019 TAAT-CAACGCAAGCT 1005 >seq699 Length=1384 Score = 73.4 bits (80), Expect = 2e-11 Identities = 55/62 (89%), Gaps = 2/62 (3%) Strand=Plus/Plus Query 63 TCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAG 122 ||| ||||||| | ||||||||||| |||||||||||||||||||||||| | |||||| Sbjct 671 TCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CGGCGCAAG 728 Query 123 CT 124 || Sbjct 729 CT 730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300791929160