Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcocystis_20neurona_20[genbank_20GCA_5F000875885.1_202015-02-13] 2,862 sequences; 130,023,008 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq86 183 5e-44 >seq86 Length=38152 Score = 183 bits (202), Expect = 5e-44 Identities = 201/263 (76%), Gaps = 6/263 (2%) Strand=Plus/Minus Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTT--GGC 74 |||| |||| ||||| |||| | |||||||||| | |||| | |||| | Sbjct 20239 CTTATATGCTTTCAGTAGTTATTTTTATTAAACTTAGCTACTCAGCAAAATACTTTTGAT 20180 Query 75 AGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAA-GGACAGCTC 133 | | ||||| |||| |||||| | | |||||||||||||||| ||| | | Sbjct 20179 AAAATAACTGAAATACCATAGGTTTAATCTCCTTGGTCCTCTCGTACTAAAGGAAA--TA 20122 Query 134 CTCTCAAAT-TTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAA 192 || | ||| ||| || | || |||||| ||||||||||||||| |||||||||||| Sbjct 20121 CTTTACAATATTCTTATGTTTACATCGGATACGGACCGAACTGTCTCACGACGTTCTGAA 20062 Query 193 CCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCC 252 |||||||| |||||| ||||||||||||||||| |||||||||| ||||| || ||||| Sbjct 20061 CCCAGCTCACGTGCCGCTTTAATGGGCGAACAGACCAACCCTTGAGACCTGCTACAGCCT 20002 Query 253 CAGGATGAGACGAGCCGACATCG 275 ||||||| ||||||||||||||| Sbjct 20001 CAGGATGCGACGAGCCGACATCG 19979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780778351832