Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcocystis_20neurona_20[genbank_20GCA_5F000875885.1_202015-02-13] 2,862 sequences; 130,023,008 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq925 159 1e-36 >seq925 Length=1190 Score = 159 bits (176), Expect = 1e-36 Identities = 243/339 (72%), Gaps = 14/339 (4%) Strand=Plus/Minus Query 164 TCTGATTAGCTAGTTGGTAAGGTAACGGCTT-ACCAAGGCGACGATCAGTAGCCGACCTG 222 ||| |||||||||||||| | |||| | || |||||||||| ||| |||||| | | || Sbjct 368 TCTAATTAGCTAGTTGGTGAAGTAATAGTTTTACCAAGGCGAAGATTAGTAGCTGCCTTG 309 Query 223 AGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAG 282 | |||| || | ||||||| | | ||| | || | | |||||||| |||||||||||| Sbjct 308 ATAGGGGGAACAGCCACATAGAGATTGAAATACAGCTCTAACTCCTAAGGGAGGCAGCAG 249 Query 283 TGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGG 342 |||||||| || |||| || |||| ||| ||| | | ||||| || ||| | Sbjct 248 TGGGGAATTTTCTGCAATAAGCGCAAGCTTGACAGAGCGTCATCACGTGAAGGAGGAAAG 189 Query 343 CC--TTCGGGTCGTAAAGCTC-TGTCCTCAAGGAAGATAATG---ACGGTACTTGAGG-- 394 || | ||| ||||| || | | || | || |||||| || | || | | Sbjct 188 CCTATATAGGTTGTAAACTTCTTTTGCTTA---AATATAATGAATACTGACGTTTAAGTT 132 Query 395 -AGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTA 453 | ||| ||||||||| |||||||||||||||||||||||| || | ||||||| Sbjct 131 TAAAAAGTATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGGGGATACGAGCGTTA 72 Query 454 TCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTT 492 ||| ||| ||| |||||||||| || |||||||| || Sbjct 71 TCCAAAATGACT-GGGCGTAAAGTGTATGTAGGTGGGTT 34 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497557138688