Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stentor_20coeruleus_20[genbank_20GCA_5F001970955.1_202017-01-25] 2,628 sequences; 77,831,160 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq2628 163 7e-38 >seq2628 Length=41645 Score = 163 bits (180), Expect = 7e-38 Identities = 197/267 (74%), Gaps = 12/267 (4%) Strand=Plus/Plus Query 12 TGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGT 71 |||||||||||| | | |||||||||| || ||||||||| | ||||| Sbjct 12155 TGCATCTTCACAACCAATTCAATTTCATCAAGATAATATTGGAGACAGTAGGACAATCGT 12214 Query 72 TACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 131 ||| |||||| |||||| ||||||||||||| ||||||| ||||||||||||||||||| Sbjct 12215 TACTCCATTCATGCAGGACGGAACTTACCCGCCAAGGAACTTCGCTACCTTAGGACCGTC 12274 Query 132 ATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCAT 191 | ||||| |||||||||||| || || | | | | ||| |||| | Sbjct 12275 AGAGTTACAGCCGCCGTTTACTGGAATTTATAGTTAAAAAT----GTT---TAACTTTTT 12327 Query 192 CAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCA 251 || | || | |||||||||||| |||| ||| |||||||| |||||| || ||| Sbjct 12328 CATT-----TTGCAGCACCGGGCAGGAGTCAGACCTTATACGTCTTCTTTCGAATTAGCA 12382 Query 252 GAGTGCTGTGTTTTTAATAAACAGTCG 278 ||| ||||||||||| |||||||||| Sbjct 12383 AAGTCCTGTGTTTTTATTAAACAGTCG 12409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260766866176