Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stentor_20coeruleus_20[genbank_20GCA_5F001970955.1_202017-01-25] 2,628 sequences; 77,831,160 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq2628 161 2e-37 >seq2628 Length=41645 Score = 161 bits (178), Expect = 2e-37 Identities = 197/267 (74%), Gaps = 14/267 (5%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | | |||||||| | || || | |||||||| ||||||| Sbjct 12156 GCATCTTCACAACCAATTCAATTTCATCAAGATAATATTGGAGACAGTAGGACAATCGTT 12215 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 || || ||| ||| || ||||||||||||| ||||||| ||||||||||||||||||| | Sbjct 12216 ACTCCATTCATGCAGGACGGAACTTACCCGCCAAGGAACTTCGCTACCTTAGGACCGTCA 12275 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTA-AGTTCACTGCTTCGATTGCTCTAACAGATC 185 |||||| ||||||||||||||| ||| |||| | | || | ||| | Sbjct 12276 GAGTTACAGCCGCCGTTTACTGGAATTTATAGTTAA-------AAATG-TTTAA-----C 12322 Query 186 CCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCA 245 || | || |||||||||||||| ||||| | ||||| || |||| ||| |||||| Sbjct 12323 TTTTTCATTTTGCAGCACCGGGCAGGAGTCAGACCTTATACGTCTTCTTTCGAATTAGCA 12382 Query 246 GAAACCTGTGTTTTTGGTAAACAGTCG 272 | ||||||||||| |||||||||| Sbjct 12383 AAGTCCTGTGTTTTTATTAAACAGTCG 12409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062372080128