Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stentor_20coeruleus_20[genbank_20GCA_5F001970955.1_202017-01-25] 2,628 sequences; 77,831,160 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq1424 170 3e-40 seq2628 77.0 6e-12 >seq1424 Length=2954 Score = 170 bits (188), Expect = 3e-40 Identities = 99/102 (97%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 134 ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTG 193 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2954 ATGATAGGAAGAGCCGACATCGAAGAATCAAAAAGCAACGTCGCTATGAACGCTTGGCTG 2895 Query 194 CCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCT 235 |||||||||||||||||||||||||| ||||||| ||||||| Sbjct 2894 CCACAAGCCAGTTATCCCTGTGGTAATTTTTCTGACACCTCT 2853 >seq2628 Length=41645 Score = 77.0 bits (84), Expect = 6e-12 Identities = 82/107 (77%), Gaps = 6/107 (6%) Strand=Plus/Plus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| |||||||||||||||||| || | ||| | || ||||| | ||| Sbjct 11632 CTGTCTCACGACGTTCTAAACCCAGCTCACGTACCATTTTAATTGGCGAACAGCCAAACC 11691 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGA 156 ||| | || || || |||| | |||| || ||||||||||||| Sbjct 11692 CTTGAAAGCGTATGCTCCTTC---AGGATATGATGAGCCGACATCGA 11735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854377546368