Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stentor_20coeruleus_20[genbank_20GCA_5F001970955.1_202017-01-25] 2,628 sequences; 77,831,160 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq2628 123 4e-26 >seq2628 Length=41645 Score = 123 bits (136), Expect = 4e-26 Identities = 148/199 (74%), Gaps = 3/199 (2%) Strand=Plus/Plus Query 77 TACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTC 136 || ||| | | ||||||||||| | | || |||||||||||||| | | ||| | Sbjct 11539 TATAACCGATACACCAGAGGTTAATTCTCTCCAGTCCTCTCGTACTAGGATAAACTCTTT 11598 Query 137 TCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCA 196 | ||||| | | || || |||||||||||||||||||| ||||||||| |||||| Sbjct 11599 TATTATTTCA-ATGTACA--ACAGATAGGGACCGAACTGTCTCACGACGTTCTAAACCCA 11655 Query 197 GCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGG 256 |||| ||| || |||||| ||||||||||| |||||||| | | | | | |||| Sbjct 11656 GCTCACGTACCATTTTAATTGGCGAACAGCCAAACCCTTGAAAGCGTATGCTCCTTCAGG 11715 Query 257 ATGAGACGAGCCGACATCG 275 || || |||||||||||| Sbjct 11716 ATATGATGAGCCGACATCG 11734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780780121808