Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stentor_20coeruleus_20[genbank_20GCA_5F001970955.1_202017-01-25] 2,628 sequences; 77,831,160 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq2628 77.0 1e-11 >seq2628 Length=41645 Score = 77.0 bits (84), Expect = 1e-11 Identities = 217/328 (66%), Gaps = 14/328 (4%) Strand=Plus/Minus Query 167 GATTAGCTAGTTGGTAAGGTAACGGCT-TACCAAGGCGACGATCAGTAGCCGACCTGAGA 225 |||||| ||||||||| ||||| || ||||||| | ||| ||| || | | | Sbjct 11219 GATTAGGTAGTTGGTAGGGTAATTGCCATACCAAGCCAGTTATCTTTAGTCGTTATTATA 11160 Query 226 GGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGG 285 | || |||||||| | |||||| |||||| | | ||||||||| Sbjct 11159 GTTTGTGCGGCCACAAGGAGTCTGAGA--------AAACTCTTCCTTA--GCAGCAGTGT 11110 Query 286 GGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCT 345 |||| ||| ||||| | ||| ||| |||| | || || || || |||||| Sbjct 11109 AGAATCTTGGACAATTAACGCAAGTTAGATCCAGCGATCCCTCGGGAATGAAGAAGGCTA 11050 Query 346 TCGGGTC-GTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGG-AGGAAGCCC 403 | || | ||||| |||| | || || ||||||| || || | | ||| | | Sbjct 11049 TGGGAGCTGTAAACTAATGTCATAAAATAAAATAATGATTTTATTTTTGTTAAGAAACAC 10990 Query 404 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTA 463 | |||| | |||||||||| |||||||| || | ||| | |||| ||||| | | Sbjct 10989 TGACTAATCATGTGCCAGCAGTCGCGGTAAGACATGGGGTGTGAGCGCTATCCACGTTGA 10930 Query 464 CTGGGGCGTAAAGGGTGCGTAGGTGGTT 491 |||| ||||||||||||||||||||| Sbjct 10929 TTGGGT-GTAAAGGGTGCGTAGGTGGTT 10903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497560643072