Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stentor_20coeruleus_20[genbank_20GCA_5F001970955.1_202017-01-25] 2,628 sequences; 77,831,160 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq521 127 2e-24 seq1981 104 2e-17 seq125 104 2e-17 >seq521 Length=94946 Score = 127 bits (140), Expect = 2e-24 Identities = 413/634 (65%), Gaps = 13/634 (2%) Strand=Plus/Minus Query 65998 CTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTC 66057 ||||| || | | | ||| || | |||||| ||||| || || || ||||| || Sbjct 25694 CTTGGTAAAG-CTACAGAGGCTAAGTTGCATACAGCAATTTCATCTTTGCTAGTATATTC 25636 Query 66058 GACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTT 66117 | ||||| ||||| | ||||| | ||| || || | ||| | ||||||| | Sbjct 25635 AAGGATTTCAGTGCATAAGTTACTTGATTTTATTGTCCCTAGATTTTTTTGATTAGAATA 25576 Query 66118 GCGATT-GCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAA 66176 ||| ||| | ||| || || | ||| || || ||||| || || | |||| |||| Sbjct 25575 CTTATTAGCA-GTATCTTTATAAAGCATATAAGGTGTGCCAGTTTCTATTTGGCTATCAA 25517 Query 66177 TGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACC--GCCCTACCTTTGCGTTC 66234 | || || ||| | || | ||||| || || | || ||| |||||| | || Sbjct 25516 TTATTGCTGACCATAATGCTTGGGCCTTGACTGTT--TTCCTTGCCATACCTTGTTGCTC 25459 Query 66235 GTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTT 66294 ||| | | ||||| || || ||| || |||| || | |||| | |||| | Sbjct 25458 GTATTTTGTATAGAGAGCATCAAATTCTTCGCCGTATACATCACAAAGACCTTGACATTG 25399 Query 66295 GTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGG 66354 | |||||||| || ||| || || | | ||| || | |||||| |||||||| Sbjct 25398 ATTAGGACACATAAGGCTCCAGTCTCCGTTTTCTTCAACTCTTTTCATAAAAAGATCAGG 25339 Query 66355 TATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATT---TTT 66411 |||||||| ||||| || ||||| | ||||| || || || | || || || ||| Sbjct 25338 GATCCAGAGAGCGTAAAAAAGATCTCTGGCTCGATGTTCTTCTTTTCCATGGTTGAGTTT 25279 Query 66412 GCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGA 66471 || | | ||||||||| ||||| |||||||| || || || || | || || | Sbjct 25278 ---CAGTTTTAAGAACTCAAAAATGTCAGCATGCCAAGGCTCAAGATAAACAGCAAATGC 25222 Query 66472 GCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAA 66531 || | | || || ||||||||||| || || ||||| || ||||| || | | Sbjct 25221 TCCTTTTCTCTTCCCCCCACCTTGGTCTACATAACGAGCTGTATCATTGAATACTCTAAG 25162 Query 66532 CATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCG 66591 ||| || || || || || || || |||||||| || ||| || | ||| | Sbjct 25161 CATAGGCACAAGACCATTTGAGTTTCCATTGGTTCCACGGATATAAGAAGATGTTGCTCT 25102 Query 66592 TATATCGTGAACATTCAGACCAATACCACCGGCC 66625 ||| | ||||||| | | || ||||| || ||| Sbjct 25101 TATGTTGTGAACACTTAAGCCTATACCCCCAGCC 25068 >seq1981 Length=53738 Score = 104 bits (114), Expect = 2e-17 Identities = 292/446 (65%), Gaps = 7/446 (2%) Strand=Plus/Minus Query 66125 CATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCG 66184 |||| ||| ||||| | ||| || ||||| || |||||| || || ||||| || || Sbjct 25969 CATG-ATCTTTGTATAGCATATAAGGAGTTCCAGTCTCAGTCTGAGATTCAATAATCGCC 25911 Query 66185 TGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCG 66244 ||| || | |||| || || || | | | ||||||| ||||| || | ||| Sbjct 25910 GCCCATAGTGTCTGTGCTTTAACAGTCCTTCTTCCTCTACCTTCACGTTCATATTTTTCA 25851 Query 66245 TAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACAC 66304 || || || || ||| ||||| || || || || | || || | | |||||| Sbjct 25850 TAAAGTGACTCAAATTCTTCTCCCCAGACATCAGAAAGTCCAGGGCAATCATTAGGACAC 25791 Query 66305 ATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGG 66364 |||| | ||| ||||||| | ||| ||||| |||||| | ||| || | ||| ||| Sbjct 25790 ATCAAAGTCCACTCACCATTTTTTTCAACACGTTTCATAAACAAATCTGGAACCCAAAGG 25731 Query 66365 GCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATT---TTTGCGCAAGTCG 66421 || | || ||||| | || | ||| ||||| | || ||| ||| ||| Sbjct 25730 CCGAAAAACAGATCTCTAGCCCTTTGTTCCTCTTTACCAATATTCCTTTTAAGCATT--- 25674 Query 66422 AGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGT 66481 || || ||||| || || ||||||||||| || | || | || || | || | | | Sbjct 25673 AGAAATTCAAATATATCCGCATGCCATGGCTCTAAATATACTGCAAAAGCTCCTTTTCTT 25614 Query 66482 TTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACG 66541 || || |||||||| || || || | ||| || || || || | ||||| || || Sbjct 25613 TTCCCCCCACCTTGATCTACATATCTAGCTGTATCATTAAAAACTCTTAACATAGGAACT 25554 Query 66542 AGCCCGTTAGATTTGCCATTGGTGCC 66567 | || || || | ||||| || || Sbjct 25553 AATCCATTTGAAGTTCCATTTGTCCC 25528 >seq125 Length=105080 Score = 104 bits (114), Expect = 2e-17 Identities = 412/640 (64%), Gaps = 14/640 (2%) Strand=Plus/Plus Query 66013 AGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA-ATTTCGGTGC 66071 |||||| | |||||| ||||| || || || | ||||| || ||| ||||| |||| Sbjct 72901 AGATGCTAAGTTGCATACAGCAATTTCATCTTTACTTGTATATTC-ACAGATTTCTGTGC 72959 Query 66072 ACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTG-CATGCA 66130 | | || || | ||| || || | || | |||||| | | || |||| | Sbjct 72960 ATAAGTTGCTTGATTTTATAGTCCCGAGGTTTTTCTGATTAGAATATCTGTTAACATG-A 73018 Query 66131 TCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAA 66190 || || || | ||| || || || || |||||| || || ||||| || || ||| Sbjct 73019 TCTTTATATAGCATATAAGGTGTCCCAGTCTCAGACTGAGATTCAATTATCGCTGCCCAC 73078 Query 66191 AGAGCGCGTGCCTTCACCGTACGTACCGCCCTA--CCTTTGCGTTCGTAATGTTCGTAGA 66248 | || | ||||| || ||| | || ||| |||| |||| || | ||| || | Sbjct 73079 ACTGCTTGGGCCTTAAC--TACTTTCCTTCCTTTTCCTTCATGTTCATATTTTTCATACA 73136 Query 66249 GGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCA 66308 | || || ||| |||||||| || || || | ||||| | | || ||||| | Sbjct 73137 ATTCCTCAAACTCTTCTCCCCATACATCAGAAAGCCCAGGACATTCATTAGGGCACATTA 73196 Query 66309 GCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGT 66368 | ||| || |||| | ||| || | |||||| | |||||| ||||| ||| || Sbjct 73197 AAGTCCAGTCGCCATTTTTTTCAACTCTTTTCATAAACAAATCAGGAATCCAAAGGCCGA 73256 Query 66369 AGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC---GTGATTTTTGCGCAAGTCGAGGA 66425 | || | || | |||||||||||| || | || || |||| ||| || | Sbjct 73257 AAAACAAGTCTCTTGCTCGTTGCTCTTCTTTACCAATGTTTCTTTTAAGCA---TTAGAA 73313 Query 66426 ACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGC 66485 | || || || || |||||||| ||||| || || | || || || || | | ||| | Sbjct 73314 AATCGAAAATATCAGCATGCCAAGGTTCAAGATAAACAGCAAATGATCCTTTTCTTTTTC 73373 Query 66486 CGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCC 66545 | |||||||| || || || | || || || || || | | ||| ||||| || | Sbjct 73374 CCCCACCTTGATCTACATATCTTGCTGTATCATTAAATACTCTAAGCATTGGTACAAGAC 73433 Query 66546 CGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACAT 66605 | ||||| | ||||| || || || |||| ||| | |||| || ||| Sbjct 73434 CATTAGAATGACCATTAGTACCTCTTATATAACTTCCTGATGCTCTAATATTATGTACAC 73493 Query 66606 TCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA 66645 | | |||||||||||| || | || || || |||||| Sbjct 73494 TAATACCAATACCACCTGCACTTTTTGATATAAGAGCACA 73533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397555266393920