Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sterkiella_20histriomuscorum_20[genbank_20GCA_5F001273305.2_202015- 12-23] 32,996 sequences; 66,368,609 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq29614 107 6e-21 >seq29614 Length=3756 Score = 107 bits (118), Expect = 6e-21 Identities = 149/204 (73%), Gaps = 6/204 (3%) Strand=Plus/Minus Query 286 GAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGC 345 ||||||| |||| || ||||| |||| ||| | || |||||||||||||| || Sbjct 1235 GAGGAAGCGAGGGA-GAAGTCAAGTCATTATGGTCTAAATATGTTGGGCTACACACGCGC 1177 Query 346 TACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTC--AAGCAAATCCCATAAAGTT 403 ||||| | || |||| | ||| ||| |||| || ||||||||| ||| | Sbjct 1176 TACAAGGTCGAAAACAATTAG--GCGCAACAGCGAAATCTGAAGCAAATCTGTAAAAATC 1119 Query 404 GTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATC 463 | | ||||||||||||| ||| |||||| | |||||| ||||||| |||||||| Sbjct 1118 GA-CAAAGTTCGGATTGTAAACTGAAACTCGTTTGCATGAAGATGGAATCATTAGTAATC 1060 Query 464 GTAGATCAGCATGCTACGGTGAAT 487 ||| || |||||| |||||||||| Sbjct 1059 GTAAATTAGCATGTTACGGTGAAT 1036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503503740160