Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stylonychia_20lemnae_20[genbank_20GCA_5F000751175.1_202014-09-07] 19,840 sequences; 50,164,522 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq4564 233 8e-59 >seq4564 Length=7546 Score = 233 bits (258), Expect = 8e-59 Identities = 221/278 (79%), Gaps = 7/278 (3%) Strand=Plus/Plus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACC 467 ||||||||| |||||||||||||||||||||| | ||||||||||| ||| ||| | Sbjct 4604 CCCGTCTTGAAACACGGACCAAGGAGTCTAACTTATATGCGAGTGTGCTAGTGGAAAAAC 4663 Query 468 CGTG-CGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGAT 526 ||||||||||| |||| || || | | | ||| ||| |||||| Sbjct 4664 TAACACGCGTAATGAAGGTGATTAA---TGCCAAGCGC--AAGCAGCAGCATTGACCGAC 4718 Query 527 CCTGATG-TCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTG 585 | |||| ||| || | |||||||| ||||||| ||| ||||||||||||||||| Sbjct 4719 CATGATCCTCTGGTGAAAGGTTTGAGTACGAGCATACAAGTTAGGACCCGAAAGATGGTG 4778 Query 586 AACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTG 645 |||||||||||| |||||||||||||| ||||||||||||||||||||| |||||| ||| Sbjct 4779 AACTATGCCTGAGTAGGGTGAAGCCAGGGGAAACTCTGGTGGAGGCTCGTAGCGGTACTG 4838 Query 646 GCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||||| |||||||| |||||||||||||||| Sbjct 4839 ACGTGCAAATCGTTCGTCAAACTTGGGTATAGGGGCGA 4876 Score = 150 bits (166), Expect = 7e-34 Identities = 135/167 (81%), Gaps = 8/167 (5%) Strand=Plus/Plus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||||| |||||| ||||||| | | |||||| |||| |||||| |||| ||||||||| | Sbjct 4195 TTCGAAGAGTCGGGTTGTTTTGTATTGCAGCCCTAAGTGGGAGATAAACTTCTTCTAAGG 4254 Query 94 CTAAATAT---TGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGC 150 |||||||| ||| || |||||||||| ||||||| |||| ||||||||||||| Sbjct 4255 CTAAATATATATGG---GAAACCGATAGCGAACAAGTACTGTGAAGGAAAGATGAAAAGA 4311 Query 151 ACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197 |||||| ||||||||| |||| || |||||| ||||| | ||||| Sbjct 4312 ACTTTGAAAAGAGAGTCAAAA--GACTTGAAATCGTTGAGAAGGAAG 4356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079574432000