Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stylonychia_20lemnae_20[genbank_20GCA_5F000751175.1_202014-09-07]
19,840 sequences; 50,164,522 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq4564 233 8e-59
>seq4564
Length=7546
Score = 233 bits (258), Expect = 8e-59
Identities = 221/278 (79%), Gaps = 7/278 (3%)
Strand=Plus/Plus
Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACC 467
||||||||| |||||||||||||||||||||| | ||||||||||| ||| ||| |
Sbjct 4604 CCCGTCTTGAAACACGGACCAAGGAGTCTAACTTATATGCGAGTGTGCTAGTGGAAAAAC 4663
Query 468 CGTG-CGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGAT 526
||||||||||| |||| || || | | | ||| ||| ||||||
Sbjct 4664 TAACACGCGTAATGAAGGTGATTAA---TGCCAAGCGC--AAGCAGCAGCATTGACCGAC 4718
Query 527 CCTGATG-TCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTG 585
| |||| ||| || | |||||||| ||||||| ||| |||||||||||||||||
Sbjct 4719 CATGATCCTCTGGTGAAAGGTTTGAGTACGAGCATACAAGTTAGGACCCGAAAGATGGTG 4778
Query 586 AACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTG 645
|||||||||||| |||||||||||||| ||||||||||||||||||||| |||||| |||
Sbjct 4779 AACTATGCCTGAGTAGGGTGAAGCCAGGGGAAACTCTGGTGGAGGCTCGTAGCGGTACTG 4838
Query 646 GCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||||||| |||||||| ||||||||||||||||
Sbjct 4839 ACGTGCAAATCGTTCGTCAAACTTGGGTATAGGGGCGA 4876
Score = 150 bits (166), Expect = 7e-34
Identities = 135/167 (81%), Gaps = 8/167 (5%)
Strand=Plus/Plus
Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93
||||| |||||| ||||||| | | |||||| |||| |||||| |||| ||||||||| |
Sbjct 4195 TTCGAAGAGTCGGGTTGTTTTGTATTGCAGCCCTAAGTGGGAGATAAACTTCTTCTAAGG 4254
Query 94 CTAAATAT---TGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGC 150
|||||||| ||| || |||||||||| ||||||| |||| |||||||||||||
Sbjct 4255 CTAAATATATATGG---GAAACCGATAGCGAACAAGTACTGTGAAGGAAAGATGAAAAGA 4311
Query 151 ACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197
|||||| ||||||||| |||| || |||||| ||||| | |||||
Sbjct 4312 ACTTTGAAAAGAGAGTCAAAA--GACTTGAAATCGTTGAGAAGGAAG 4356
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079574432000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |