Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stylonychia_20lemnae_20[genbank_20GCA_5F000751175.1_202014-09-07] 19,840 sequences; 50,164,522 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq17176 159 9e-37 >seq17176 Length=816 Score = 159 bits (176), Expect = 9e-37 Identities = 196/268 (73%), Gaps = 10/268 (4%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||| ||||| | ||||||||||| || | ||||||||| | || ||||| Sbjct 71 GCATTTTCACCTAAAATTCAATTTCACCGAAATATAGTTGGAGACAGTGGGGCAGTCGTT 130 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 ||||||||| |||||| ||||||||||||| ||||||||||||||||||| ||||||| | Sbjct 131 ACGCCATTCATGCAGGACGGAACTTACCCGCCAAGGAATTTCGCTACCTTCGGACCGTCA 190 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGA-TCAAGAGCTTCGCGTTAGCTAACCCCAT 191 ||||| |||||||||||||||| || | | | ||| || | | | | Sbjct 191 GGGTTACAGCCGCCGTTTACCGGGATTTGAACTAATAAGCCTCACTTATGGT-------- 242 Query 192 CAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCA 251 || | ||| | |||| |||||||||||| || |||||| | || || ||| Sbjct 243 -TTTTCATCTTACAGCACTGGGCAGGCGTCAGACTCTATACATAATTATTAAATTTCGCA 301 Query 252 GAGTGCTGTGTTTTTAATAAACAGTCGC 279 |||| ||||||||||| ||||||||||| Sbjct 302 GAGTCCTGTGTTTTTAGTAAACAGTCGC 329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260549857280