Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stylonychia_20lemnae_20[genbank_20GCA_5F000751175.1_202014-09-07] 19,840 sequences; 50,164,522 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq17176 190 4e-46 >seq17176 Length=816 Score = 190 bits (210), Expect = 4e-46 Identities = 261/355 (74%), Gaps = 16/355 (5%) Strand=Plus/Plus Query 6 GGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTG-AGACAGTGCCCAAATCG 64 ||||| |||||| | | |||||||||||| ||| |||| |||||||| | ||| Sbjct 70 GGCATTTTCACCTAAAATTCAATTTCACCGAAA-TATAGTTGGAGACAGTGGGGCAGTCG 128 Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124 ||||||| ||| ||| || ||||||||||||| ||||||||||||||||||| ||||||| Sbjct 129 TTACGCCATTCATGCAGGACGGAACTTACCCGCCAAGGAATTTCGCTACCTTCGGACCGT 188 Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGAT 184 | ||||| |||||||||||| ||| || | ||| | | | | || | | | Sbjct 189 CAGGGTTACAGCCGCCGTTTACCGGGATTTGA----ACTAATAAGCCT-CACTTATGGTT 243 Query 185 CCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGC 244 || | ||| |||||| ||||||||||||| |||||||| | | | || || Sbjct 244 ---TTTCATCTTACAGCACTGGGCAGGCGTCAGACTCTATACATAATTATTAAATTTCGC 300 Query 245 AGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAGAC 304 ||| ||||||||||| ||||||||||||| || ||| | | | | || | Sbjct 301 AGAGTCCTGTGTTTTTAGTAAACAGTCGCT---ACCCGCTCTTTTAAGACACTAATTG-T 356 Query 305 AGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTT-AACAATA 358 || | | ||||||||||||||||||| || ||||||||||||||||| ||| ||| Sbjct 357 AGTC-CTCCTTCTCCCTAAGTTACGGAGTTATTTTGCCGAGTTCCTTCAACTATA 410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062189219840