Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stylonychia_20lemnae_20[genbank_20GCA_5F000751175.1_202014-09-07] 19,840 sequences; 50,164,522 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq4564 298 9e-79 >seq4564 Length=7546 Score = 298 bits (330), Expect = 9e-79 Identities = 225/260 (87%), Gaps = 6/260 (2%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| || | |||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct 3160 TACTCGCTGTATGCGTCAGTGTAGCACGCGTGCGGCCCAGGACATCTAAGGGCATCACAG 3101 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG- 119 ||||||||||||||||||||||| ||| | | | | ||||||||||||||| || Sbjct 3100 ACCTGTTATTGCCTCAAACTTCC-TTGTGTTTAGTCACAAAGTCCCTCTAAGAAGTCAAG 3042 Query 120 -CCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178 || | | || | ||| | ||| |||| ||| ||||||||||||||||| |||||| Sbjct 3041 TCCGCTTAACAACG--GATCGA-CTAGTTAGTAGGCTAAGGTCTCGTTCGTTAACGGAAT 2985 Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2984 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 2925 Query 239 GAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||| Sbjct 2924 GAAAGAGCTATCAATCTGTC 2905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796646855040