Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stylonychia_20lemnae_20[genbank_20GCA_5F000751175.1_202014-09-07] 19,840 sequences; 50,164,522 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq4564 358 1e-96 seq13645 224 2e-56 >seq4564 Length=7546 Score = 358 bits (396), Expect = 1e-96 Identities = 238/263 (90%), Gaps = 1/263 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 6924 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 6865 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||| ||||||||||||| || ||| |||||||||||| ||||||||||||||||| Sbjct 6864 TTAGCGGGTGAACAATCCGACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGA 6805 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6804 CATCGAAGAATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 6745 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||||||| | ||| || | | | |||||||||||||| Sbjct 6744 CTGTGGTAACTTTTCTGACACCTCTAGCTTAAAACTTTTAAAG-CAAAAGGATCGATAGG 6686 Query 271 CCACACTTTCATGGTTTGTATTC 293 ||| |||||| |||||||||| Sbjct 6685 CCATGCTTTCACAGTTTGTATTC 6663 >seq13645 Length=394 Score = 224 bits (248), Expect = 2e-56 Identities = 148/164 (90%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 164 TCATCAGTAGGGTAAAACTAACCTGTCTCACAACGGTCTAAACCCAGCTCACGTTCCCTG 105 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||| ||||||||||||| || | | || || |||||| ||||||||||||||||| Sbjct 104 TTAGCGGGTGAACAATCCGACACGTTGAGATTTGTGCTTCTCAATGATAGGAAGAGCCGA 45 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGC 194 |||||||||||||||||||||||||||||||| ||||||||||| Sbjct 44 CATCGAAGGATCAAAAAGCAACGTCGCTATGATCGCTTGGCTGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854230487040