Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stylonychia_20lemnae_20[genbank_20GCA_5F000751175.1_202014-09-07] 19,840 sequences; 50,164,522 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq4564 212 1e-52 >seq4564 Length=7546 Score = 212 bits (234), Expect = 1e-52 Identities = 205/259 (79%), Gaps = 6/259 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 ||||||||||||||| | | || | | ||||||||||||||||||||||||||||| Sbjct 3047 CTTCTTAGAGGGACTTTGTGACTAAACACAAGGAAGTTTGAGGCAATAACAGGTCTGTGA 3106 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 ||||||||||||| |||||||||||||| ||||||||||| | || ||||| | || | Sbjct 3107 TGCCCTTAGATGTCCTGGGCCGCACGCGTGCTACACTGACGCATACAGCGAGTACTTC-C 3165 Query 192 CTTGGCCGGAAGG--TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249 | ||| ||| || ||||||| || | |||||| |||||||||| | || Sbjct 3166 CAGCTCCGTGAGGCAGCT-GGTAATC--AGCAATATGCGTCGTGATGGGGATAGATCTTT 3222 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 | |||||| | |||| |||||||||| |||||||||||| ||||| ||| ||| |||| Sbjct 3223 GGAATTATAGATCTTGAACGAGGAATTCCTAGTAAGCGCAAGTCATTAGCTTGCGCTGAT 3282 Query 310 TACGTCCCTGCCCTTTGTA 328 || |||||||||||||||| Sbjct 3283 TAAGTCCCTGCCCTTTGTA 3301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947012075520