Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stylonychia_20lemnae_20[genbank_20GCA_5F000751175.1_202014-09-07] 19,840 sequences; 50,164,522 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq18712 275 1e-71 >seq18712 Length=506 Score = 275 bits (304), Expect = 1e-71 Identities = 255/321 (79%), Gaps = 18/321 (6%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct 167 AGTGCACATGGTGGATGCCTTGGCGATATCAGGCGATGAAGGACGTAGTAGCTTGCGAAA 226 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 |||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||| Sbjct 227 AGCTGCGGGGAGCTGGCAAACAAGCTTTGATCCGCAGATGTCCGAATGGGGAAACCCGGC 286 Query 121 C--CTTTGGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAA 178 | | | ||||| | | ||| ||| | ||| ||| || |||||||| Sbjct 287 CAGCAAT-GGTCACT-----CAGAA---------ATG-AGAGCAAACCTGGAGAACTGAA 330 Query 179 ACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238 ||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||| Sbjct 331 ACATCTAAGTACCCAGAGGAAAAGAAATCAACCGAGATTCCGAAAGTAGTGGCGAGCGAA 390 Query 239 ATGGGATGAGCCTTTACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGCC 298 |||||| |||||| | || ||| |||||| | || |||||| ||| Sbjct 391 ATGGGAAGAGCCTGCAAGATTTAGCACCTTTGATAATAAAACGGATTGGAAACTCCGGCC 450 Query 299 ATAGCGGGTGATAGCCCCGTA 319 |||| |||||||||||||||| Sbjct 451 ATAGAGGGTGATAGCCCCGTA 471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918217789440