Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stylonychia_20lemnae_20[genbank_20GCA_5F000751175.1_202014-09-07] 19,840 sequences; 50,164,522 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq17176 123 8e-26 >seq17176 Length=816 Score = 123 bits (136), Expect = 8e-26 Identities = 105/127 (83%), Gaps = 2/127 (2%) Strand=Plus/Plus Query 349 CAATTTCACCGGGCCTGTGGTTG-AGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGT 407 ||||||||||| | | |||| |||||| ||| |||||||||||||||| |||||| Sbjct 89 CAATTTCACCGAAA-TATAGTTGGAGACAGTGGGGCAGTCGTTACGCCATTCATGCAGGA 147 Query 408 CGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTT 467 ||||||||||||| ||||||||||||||||||| ||| || | ||||| |||||||| Sbjct 148 CGGAACTTACCCGCCAAGGAATTTCGCTACCTTCGGACCGTCAGGGTTACAGCCGCCGTT 207 Query 468 TACTGGG 474 ||| ||| Sbjct 208 TACCGGG 214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702062243840