Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stylonychia_20lemnae_20[genbank_20GCA_5F000751175.1_202014-09-07] 19,840 sequences; 50,164,522 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq4564 526 7e-147 >seq4564 Length=7546 Score = 526 bits (582), Expect = 7e-147 Identities = 399/465 (86%), Gaps = 7/465 (2%) Strand=Plus/Minus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| ||||||||||||||| | ||| |||||||||||||| ||||||||||||||||| Sbjct 2162 TATTTCTTGTCACTACCTCCCTGAGTCAGGATTGGGTAATTTACGCGCCTGCTGCCTTCC 2103 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 || |||||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct 2102 TTAGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATCCTCCGTTA 2043 Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG 222 ||||| | ||||||||| ||| || ||||||||||||| |||| ||||||||| ||| Sbjct 2042 CCCGTGAACGCCATGGTAGTCCAATACACTACCATCGAAAGCTGATGGGGCAGAAACTTG 1983 Query 223 AATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCA-AGG 281 ||||| ||||| ||| ||| |||||||||||| | ||||||||||| ||| || | Sbjct 1982 AATGATGTATCGCGGGC-AAAGCCCATGCGATTCGATCAGTTATTATGAGTCATCACAAT 1924 Query 282 AGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTCGGGGTT 339 || | | | | ||||||| |||||||||||||||| ||||||| |||| ||| || Sbjct 1923 AGACACAAGGAATATTGGTTTGTTATCTAATAAATACAGCCCTTCCTAAAAGTTGGGCTT 1864 Query 340 TTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAAT 399 |||||||||||||||||||||||||||||||||||||||| | | |||||||| Sbjct 1863 AACAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA-AATTCGATTATCAAAT 1805 Query 400 AAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAG 459 |||| ||||||| ||||||||||||||||||||||||||||||| | |||||||||| Sbjct 1804 AAACTATAACTGTTTTAATGAGCCATTCGCAGTTTCACTGTATAACAT--TTATACTTAG 1747 Query 460 ACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1746 ACATGCATGGCTTAGTCTTTGAGACAAGCATATGACTACTGGCAG 1702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510100336640