Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stylonychia_20lemnae_20[genbank_20GCA_5F000751175.1_202014-09-07] 19,840 sequences; 50,164,522 total letters Query= NC_010356.1 Length=190032 Score E Sequences producing significant alignments: (Bits) Value seq4746 86.0 8e-12 >seq4746 Length=3986 Score = 86.0 bits (94), Expect = 8e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 115431 CATTAAAATTGGAATTTGAAAAAGTGTATATGCCCTATTTGTTAATTTGCAAGAAACGCT 115490 || ||||| | ||||||||||| | ||| || || ||| | || |||||| | | Sbjct 1024 CAATAAAACTCGAATTTGAAAAGATTTATTGTCCTTACTTGCTTATGAACAAGAAGAGAT 965 Query 115491 ATATAGGTGCCCATTGGACAAAGCCAGAGATGTATGATAAAATCGATACAAAAGGTGTTG 115550 || ||| | |||||| || |||| || ||||||||||||||| |||||||| ||| Sbjct 964 ATGCTGGTTTGCTTTGGACTAACCCAGTGAAATATGATAAAATCGATGCAAAAGGTATTG 905 Query 115551 AAACGGCTAGAAGGGACAATTG 115572 | || | |||||| || ||||| Sbjct 904 AGACAGTTAGAAGAGATAATTG 883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 607823622348800