Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq632 125 4e-27 seq757 122 5e-26 seq590 116 2e-24 seq1535 71.6 8e-11 >seq632 Length=425157 Score = 125 bits (138), Expect = 4e-27 Identities = 98/117 (84%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||||| || ||||| | |||| | || Sbjct 108106 GAACCCAAAGACTTTGATTTCTCATAAGGTGCTGAAGGAGTCGTATAAGTAACGACCTCC 108047 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||| ||||| ||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct 108046 AATCTCTAGTTGGCATAGTTTATGGTTAAGACTAGGACGGTATCTGATCGTCTTCGA 107990 >seq757 Length=362603 Score = 122 bits (134), Expect = 5e-26 Identities = 97/117 (83%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||||| || ||||| | |||| | || Sbjct 281896 GAACCCAAAGACTTTGATTTCTCATAAGGTGCTGAAGGAGTCGTATAAGTAACGACCTCC 281955 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||| ||||| ||||||||||| |||||| |||| |||||||||||||||||||||| Sbjct 281956 AATCTCTAGTTGGCATAGTTTATGGTTAAAACTAGGACGGTATCTGATCGTCTTCGA 282012 >seq590 Length=453525 Score = 116 bits (128), Expect = 2e-24 Identities = 96/117 (82%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||||| || |||| | |||| | || Sbjct 269208 GAACCCAAAGACTTTGATTTCTCATAAGGTGCTGAAGGAGTGGTATAAGTAACGACCTCC 269149 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||| ||||| ||||||||||| | ||||||||| |||||||||||||||||||||| Sbjct 269148 AATCTCTAGTTGGCATAGTTTATGCTTAAGACTAGGACGGTATCTGATCGTCTTCGA 269092 >seq1535 Length=123307 Score = 71.6 bits (78), Expect = 8e-11 Identities = 47/52 (90%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 66 CTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||| |||||||||| ||||||||||| |||||||||||| ||||||||| Sbjct 70600 CTAGTTGGCATAGTTTGCGGTTAAGACTGGGACGGTATCTGACCGTCTTCGA 70549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278374714320