Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq171 75.2 3e-11 >seq171 Length=929816 Score = 75.2 bits (82), Expect = 3e-11 Identities = 90/122 (74%), Gaps = 3/122 (2%) Strand=Plus/Plus Query 30 TCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTACGCCATTCGTGCAGGT 89 |||||||| ||| | |||| | ||||| | | || |||| || || ||| || Sbjct 155218 TCAATTTCTGAGAGACGAGGGTAGTGACAGTGAGGAAGTCATTACACCGCTCATGCTGGA 155277 Query 90 CGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT---TATTGTTACGGCCGCC 146 ||||||||||| | |||||||||| |||||||||||||| | || |||| |||||| Sbjct 155278 CGGAACTTACCTGTCAAGGAATTTTGCTACCTTAGGACCTTTCCTAACCTTACAGCCGCC 155337 Query 147 GT 148 || Sbjct 155338 GT 155339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260677853696