Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq416 93.3 7e-17 seq21 93.3 7e-17 seq93 84.2 4e-14 seq553 77.0 5e-12 >seq416 Length=575787 Score = 93.3 bits (102), Expect = 7e-17 Identities = 93/118 (79%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | |||||| || |||||| || |||| |||| || | | Sbjct 220506 GTACGAGAGGAACA-CTTCGTTCAGA-TACTTGGTTAATGTGGCTAGCTGAAAAGCTAAT 220449 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 || |||||||| |||||| ||||||| | ||||||||||||||||| |||||||||| Sbjct 220448 ACCACGAAGCTATCATCTGTTGGATTACGACTGAACGCCTCTAAGTCGGAATCCATGC 220391 >seq21 Length=1804639 Score = 93.3 bits (102), Expect = 7e-17 Identities = 93/118 (79%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | |||||| || |||||| || |||| |||| || | | Sbjct 553185 GTACGAGAGGAACA-CTTCGTTCAGA-TACTTGGTTAATGTGGCTAGCTGAAAAGCTAAT 553242 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 || |||||||| |||||| ||||||| | ||||||||||||||||| |||||||||| Sbjct 553243 ACCACGAAGCTATCATCTGTTGGATTACGACTGAACGCCTCTAAGTCGGAATCCATGC 553300 >seq93 Length=1160758 Score = 84.2 bits (92), Expect = 4e-14 Identities = 78/98 (80%), Gaps = 1/98 (1%) Strand=Plus/Minus Query 21 TTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGC 80 |||||| || |||||| || |||| |||| || | | || |||||||| |||||| Sbjct 876268 TTCAGA-TACTTGGTTAATGTGGCTAGCTGAAAAGCTAATACCACGAAGCTATCATCTGT 876210 Query 81 TGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||| ||| | ||||||||||||||||| |||||||||| Sbjct 876209 TGGGTTACGACTGAACGCCTCTAAGTCGGAATCCATGC 876172 >seq553 Length=483461 Score = 77.0 bits (84), Expect = 5e-12 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 62 CCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 || |||||||| |||||| ||||||| | ||||||||||||||||| |||||||||| Sbjct 336818 CCACGAAGCTATCATCTGTTGGATTACGACTGAACGCCTCTAAGTCGGAATCCATGC 336762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819123116032