Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_028270.1 Length=24837 Score E Sequences producing significant alignments: (Bits) Value seq1267 80.6 4e-11 >seq1267 Length=187107 Score = 80.6 bits (88), Expect = 4e-11 Identities = 86/114 (75%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 17012 ACAAGACATCGTAGTGCTTATACATTTTATAAAAAATTAAATAAAGGATATTTAACATCA 17071 ||||||||| ||||||||| ||||| ||||| ||| || | | |||| || Sbjct 174484 ACAAGACATAAATGTGCTTATAATTTTTACAAAAAGGGAAAACAACGTAAAATAACTTCT 174543 Query 17072 TTTATTTTATTTGATGAATATGGTATTGAAAATTGTTTTATTGAATTATTAGAA 17125 ||| |||||||||||||||||| ||||||||||| |||||| || ||||| Sbjct 174544 TTTGATTTATTTGATGAATATGGAATTGAAAATTGCAAAATTGAACTAATAGAA 174597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79351110291200