Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_031903.1 Length=172345 Score E Sequences producing significant alignments: (Bits) Value seq747 100 3e-16 >seq747 Length=368976 Score = 100 bits (110), Expect = 3e-16 Identities = 210/307 (68%), Gaps = 16/307 (5%) Strand=Plus/Plus Query 162079 GGTATCTTGGGTGGTGCTTTGCTCTCTGCTATTCACGGTGTGACTGTTGAAAACACGCTC 162138 || || || || || ||| | || || ||||| || |||| ||||| ||||| || Sbjct 84005 GGAATATTAGGAGGAGCTCTACTATCAGCTATCCATGGTGCTACTGTCATTAACACTCTT 84064 Query 162139 TACCAAGATGGTGAACAAGCAAATACT---TTCAAGGCTTTTGACTCTACGCAAG--AG- 162192 || ||||||| | | ||| ||||| || ||||| ||| || |||| || Sbjct 84065 TATCAAGATGCT---CGTGCATATACTACTTTTCGTGCTTT---CTC-AC-CAAGTCAGC 84116 Query 162193 --GAGGAGACTTACTCGATGGTTACTGCGAACCGTTTCTGGTCACAGATCTTCGGTATTG 162250 || || ||||| || ||| |||| || || ||||||||||| || || || ||| | | Sbjct 84117 CAGAAGAAACTTATTCAATGCTTACAGCTAATCGTTTCTGGTCTCAAATATTTGGTGTAG 84176 Query 162251 CTTTTAGTAATAAGCGTTGGTTGCATTTCTTTATGCTCTTCGTTCCCGTCATGGGTCTCT 162310 |||| |||||| | ||| | |||||||| ||||| || || || | ||| | | Sbjct 84177 CTTTCTCAAATAAGAGATGGCTTCATTTCTTCATGCTATTTGTACCTCTAGGAGGTATGT 84236 Query 162311 GGACAAGTTCTATCGGTATTATTGGACTCGCTCTTAATCTTCGTGCTTACGACTTTGTAT 162370 || || ||| || ||||| |||||| | || ||||| | | ||||| || ||| | | Sbjct 84237 GGGCATCTTCAATTGGTATCATTGGATTAGCATTTAATTTAAGAGCTTATGATTTTATTT 84296 Query 162371 CTCAGGA 162377 |||| || Sbjct 84297 CTCAAGA 84303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 551309228366400