Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_031906.1 Length=198190 Score E Sequences producing significant alignments: (Bits) Value seq747 156 5e-33 >seq747 Length=368976 Score = 156 bits (172), Expect = 5e-33 Identities = 225/314 (72%), Gaps = 4/314 (1%) Strand=Plus/Plus Query 190560 GGAGGAGCACTACTGTCAGCAATCCATGGTGTGACTGTAGAGAATACTTTGTATGAAGAT 190619 |||||||| ||||| ||||| |||||||||| ||||| || ||| | ||| ||||| Sbjct 84014 GGAGGAGCTCTACTATCAGCTATCCATGGTGCTACTGTCATTAACACTCTTTATCAAGAT 84073 Query 190620 GGT-GAACAAGCAAAC-ACGTTTAAAGCATTCGACTCTACACAAGAGGAAGAGACCTATT 190677 | | | || | || || ||| || ||| | | || ||||| || |||| Sbjct 84074 GCTCGTGCAT--ATACTACTTTTCGTGCTTTCTCACCAAGTCAGCCAGAAGAAACTTATT 84131 Query 190678 CGATGGTCACTGCCAACCGTTTCTGGTCTCAAATCTTTGGTGTTGCGTTCAGTAATAAGA 190737 | ||| | || || || ||||||||||||||||| |||||||| || ||| ||||||| Sbjct 84132 CAATGCTTACAGCTAATCGTTTCTGGTCTCAAATATTTGGTGTAGCTTTCTCAAATAAGA 84191 Query 190738 GGTGGTTGCATTTCTTTATGCTCTTTGTTCCTGTTATGGGTCTGTGGACTTCTTCCATCG 190797 | ||| | |||||||| ||||| ||||| ||| | ||| ||||| | ||||| || | Sbjct 84192 GATGGCTTCATTTCTTCATGCTATTTGTACCTCTAGGAGGTATGTGGGCATCTTCAATTG 84251 Query 190798 GTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTATCCCAAGAGATCAGAG 190857 |||| ||||| | || | || | | |||||||| ||| | || ||||| | | || Sbjct 84252 GTATCATTGGATTAGCATTTAATTTAAGAGCTTATGATTTTATTTCTCAAGAATTGAAAG 84311 Query 190858 CAGCAGAAGATCCA 190871 ||||||||||| || Sbjct 84312 CAGCAGAAGATACA 84325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634003212912000