Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_031922.1 Length=174830 Score E Sequences producing significant alignments: (Bits) Value seq747 134 2e-26 seq1829 82.4 9e-11 >seq747 Length=368976 Score = 134 bits (148), Expect = 2e-26 Identities = 215/309 (70%), Gaps = 0/309 (0%) Strand=Plus/Plus Query 164460 GGTGGTGCTCTTCTCTGTGCTATTCATGGTGCTACCGTAGAGAATACTTTGTTTGAAGAT 164519 || || ||||| || | ||||| ||||||||||| || || ||| | | | ||||| Sbjct 84014 GGAGGAGCTCTACTATCAGCTATCCATGGTGCTACTGTCATTAACACTCTTTATCAAGAT 84073 Query 164520 GGTGAACAATCAAATACTTTCAAGGCATTCGAGCCTACTCAAGAGGAAGAGACTTACTCG 164579 | | || | |||||| || ||| || | ||| ||||| ||||| || Sbjct 84074 GCTCGTGCATATACTACTTTTCGTGCTTTCTCACCAAGTCAGCCAGAAGAAACTTATTCA 84133 Query 164580 ATGGTCACTGCCAACCGCTTCTGGTCTCAGATTTTTGGTATTGCTTTCAGCAATAAGCGT 164639 ||| | || || || || ||||||||||| || |||||| | |||||| |||||| | Sbjct 84134 ATGCTTACAGCTAATCGTTTCTGGTCTCAAATATTTGGTGTAGCTTTCTCAAATAAGAGA 84193 Query 164640 TGGTTGCACTTCTTTATGCTCTTTGTTCCTGTCATGGGACTTTGGACAAGTTCTATTGGT 164699 ||| | || ||||| ||||| ||||| ||| | || | ||| || ||| |||||| Sbjct 84194 TGGCTTCATTTCTTCATGCTATTTGTACCTCTAGGAGGTATGTGGGCATCTTCAATTGGT 84253 Query 164700 ATCATCGGTCTCGCACTCAATCTTCGTGCTTATGATTTTGTGTCTCAGGAGATTAGAGCA 164759 ||||| || | ||| | ||| | | |||||||||||| | ||||| || | | |||| Sbjct 84254 ATCATTGGATTAGCATTTAATTTAAGAGCTTATGATTTTATTTCTCAAGAATTGAAAGCA 84313 Query 164760 GCAGAGGAT 164768 ||||| ||| Sbjct 84314 GCAGAAGAT 84322 >seq1829 Length=69660 Score = 82.4 bits (90), Expect = 9e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 164757 GCAGCAGAGGATCCTGAATTTGAGACGTTCTATACGAAGAACATCCTCCTCAATGAAGGA 164816 |||||||| |||||||||||||| || |||||||| |||||||| || ||||||||||| Sbjct 44152 GCAGCAGAAGATCCTGAATTTGAAACATTCTATACAAAGAACATTCTACTCAATGAAGGT 44093 Query 164817 CTCCGTGCCTGGATGGCT 164834 | || ||||||||| Sbjct 44092 ATACGACTTTGGATGGCT 44075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559260265379200