Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetmemena_20sp._20SeJ-2015_20[genbank_20GCA_5F001273295.2_202015-12- 23] 25,219 sequences; 60,638,083 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq17561 210 3e-52 >seq17561 Length=7580 Score = 210 bits (232), Expect = 3e-52 Identities = 191/233 (82%), Gaps = 7/233 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||| ||| || | |||||| |||||||||||||||| | Sbjct 4192 GTACAAAGGGCAGGGACTTAATCAGCGCAAGGTA-ATGACTTGCGCTTACTAGGAATT-C 4249 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAA-ATTTCAAAGATT 119 |||||| |||| | | |||| ||| |||||||||||||||||| | | ||| | |||| Sbjct 4250 CTCGTTCAAGATCTATAATTCCAAAGATCTATCCCCATCACGACGCATATTGCT--GATT 4307 Query 120 ACCCGGA-CCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 ||| | ||| |||| || || ||||| || || | |||||||||| ||||||| Sbjct 4308 ACCAGCTGCCTCTCGGAGCTGG-GAAGTACTCGCTGTATGCGTCAGTGTAGCACGCGTGC 4366 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 ||||||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct 4367 GGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTG 4419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751816279585