Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetmemena_20sp._20SeJ-2015_20[genbank_20GCA_5F001273295.2_202015-12- 23] 25,219 sequences; 60,638,083 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq17561 266 6e-69 >seq17561 Length=7580 Score = 266 bits (294), Expect = 6e-69 Identities = 208/246 (85%), Gaps = 3/246 (1%) Strand=Plus/Minus Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGG 132 |||||| |||| ||||||||||||||| | |||||| || |||||||||||||||| Sbjct 5073 TTTTACCTTGAGAAAATTAGAGTGTTCCAGGCAGGCTCGCGCCGGAATACATTAGCATGG 5014 Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTA 192 |||||||||||||||| | | ||| ||||||||||| |||| | |||||||||| Sbjct 5013 AATAATAGAATAGGACTTTAG--TCTCCTTTGTTGGTTTGAGGGACTGAAGTAATGATTA 4956 Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252 ||||||||||| ||||| | |||||| ||||||||||||||||||||| |||||| || Sbjct 4955 ATAGGGATAGTTGGGGGCATTAGTATTTAATTGTCAGAGGTGAAATTCTCGGATTTGTTA 4896 Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 |||||||||| ||||||||| || |||||||||||||||||||||| |||||||||| Sbjct 4895 AAGACTAACTTATGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGT 4837 Query 313 TAGGGG 318 |||||| Sbjct 4836 TAGGGG 4831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914969195712