Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetmemena_20sp._20SeJ-2015_20[genbank_20GCA_5F001273295.2_202015-12- 23] 25,219 sequences; 60,638,083 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq22850 91.5 1e-16 >seq22850 Length=504 Score = 91.5 bits (100), Expect = 1e-16 Identities = 134/183 (73%), Gaps = 14/183 (8%) Strand=Plus/Plus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| | |||||||||||||||| || ||||| ||||| |||| Sbjct 167 GGTGGATGCCTTGGCGATTACAGGCGAAGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 226 Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCG---ATA----T 119 || | |||| | | |||||||| |||| ||||||||||| |||||| || Sbjct 227 GAGTCGGCAAACAGACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCGTAAGGTC 286 Query 120 ATTGGAGA-TATAT-CATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAACATCTAA 177 |||| | | | || |||| | | | | | |||||||||| |||||||||||||||| Sbjct 287 ATTGCACACTGAATACATA--GGT--GTGCAAAGCGAACGTGGCGAACTGAAACATCTAA 342 Query 178 GTA 180 ||| Sbjct 343 GTA 345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476683513439